JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZBTB38_chr3_141363504_141454792	0/0	g0219	1	0	1	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0220	1	0	1	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0221	1	0	0	0	0	1	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0222	1	0	1	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0223	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0224	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0225	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0226	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0227	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0228	1	0	1	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0229	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0230	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0231	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0232	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0233	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0234	1	0	1	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0235	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0236	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0237	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0238	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0239	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0240	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0241	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0242	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0243	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0244	1	0	1	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0245	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0246	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0247	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0248	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0249	1	0	0	1	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0250	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0251	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0252	1	1	0	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB38_chr3_141363504_141454792	0/0	g0253	1	0	1	0	0	0	ZBTB38	chr3	141363504	141454792
ZBTB39_chr12_56993836_57011546	1/0	g0001	143	35	35	55	4	13	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0002	54	13	11	26	1	3	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0003	26	1	7	16	0	2	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0004	16	15	1	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0005	10	0	0	10	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0006	8	0	6	0	0	2	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0007	5	1	2	0	2	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0008	5	4	1	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0009	5	0	0	5	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0010	2	0	0	2	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0011	2	2	0	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0012	2	0	2	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0013	2	0	2	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0014	2	2	0	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0015	2	2	0	0	0	0	ZBTB39	chr12	56993836	57011546