JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZBTB39_chr12_56993836_57011546	0/0	g0016	2	0	0	0	2	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0017	2	2	0	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0018	1	0	1	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0019	1	0	0	0	0	1	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0020	1	0	0	1	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0021	1	0	0	1	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0022	1	0	0	0	0	1	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0023	1	0	0	1	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0024	1	0	0	0	1	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0025	1	0	0	1	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0026	1	1	0	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0027	1	1	0	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0028	1	1	0	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0029	1	0	1	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0030	1	1	0	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/1	g0031	1	0	0	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0032	1	0	0	1	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0033	1	0	0	0	0	1	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0034	1	1	0	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0035	1	0	1	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0036	1	0	1	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0037	1	0	1	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0038	1	0	0	1	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0039	1	1	0	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0040	1	1	0	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0041	1	0	0	1	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0042	1	0	0	1	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0043	1	1	0	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0044	1	0	0	0	0	1	ZBTB39	chr12	56993836	57011546
ZBTB39_chr12_56993836_57011546	0/0	g0045	1	1	0	0	0	0	ZBTB39	chr12	56993836	57011546
ZBTB3_chr11_62745963_62759160	1/1	g0001	207	42	35	97	14	17	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0002	51	6	17	22	1	5	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0003	28	0	1	26	0	1	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0004	25	3	8	9	0	5	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0005	18	16	2	0	0	0	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0006	11	11	0	0	0	0	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0007	6	0	1	5	0	0	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0008	6	6	0	0	0	0	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0009	3	0	1	0	0	2	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0010	3	3	0	0	0	0	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0011	2	2	0	0	0	0	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0012	2	2	0	0	0	0	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0013	2	2	0	0	0	0	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0014	1	1	0	0	0	0	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0015	1	0	1	0	0	0	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0016	1	0	0	1	0	0	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0017	1	1	0	0	0	0	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0018	1	1	0	0	0	0	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0019	1	0	0	0	1	0	ZBTB3	chr11	62745963	62759160
ZBTB3_chr11_62745963_62759160	0/0	g0020	1	0	0	1	0	0	ZBTB3	chr11	62745963	62759160