JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZBTB41_chr1_197148682_197206293	0/0	g0238	1	0	0	1	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0239	1	0	0	0	0	1	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0240	1	0	0	0	1	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0241	1	0	0	0	0	1	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0242	1	0	1	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0243	1	0	0	1	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0244	1	0	1	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0245	1	0	0	0	0	1	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0246	1	0	0	1	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0247	1	0	1	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0248	1	1	0	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0249	1	0	0	1	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0250	1	0	0	1	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0251	1	1	0	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0252	1	0	0	1	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0253	1	1	0	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0254	1	0	0	1	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0255	1	1	0	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0256	1	0	1	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	1/0	g0257	1	0	0	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0258	1	1	0	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0259	1	1	0	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0260	1	1	0	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0261	1	1	0	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0262	1	1	0	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0263	1	0	1	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB41_chr1_197148682_197206293	0/0	g0264	1	1	0	0	0	0	ZBTB41	chr1	197148682	197206293
ZBTB42_chr14_104796101_104809712	1/0	g0000	99	16	12	62	0	8	ZBTB42	chr14	104796101	104809712
ZBTB43_chr9_126800040_126843210	0/0	g0001	6	0	2	0	4	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0002	5	0	0	5	0	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0003	4	0	1	0	2	1	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0004	4	0	0	4	0	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0005	3	0	1	0	2	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0006	3	0	1	0	0	2	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0007	3	0	0	3	0	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0008	2	2	0	0	0	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0009	2	2	0	0	0	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0010	2	0	1	1	0	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0011	2	0	0	1	0	1	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0012	2	0	2	0	0	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0013	2	2	0	0	0	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0014	2	0	0	2	0	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0015	2	0	0	1	0	1	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0016	2	0	0	2	0	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0017	2	2	0	0	0	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0018	2	2	0	0	0	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0019	2	2	0	0	0	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0020	1	0	0	1	0	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0021	1	0	0	1	0	0	ZBTB43	chr9	126800040	126843210
ZBTB43_chr9_126800040_126843210	0/0	g0022	1	1	0	0	0	0	ZBTB43	chr9	126800040	126843210