JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZBTB48_chr1_6574994_6594280	0/0	g0083	1	1	0	0	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0084	1	0	0	1	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0085	1	0	0	1	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0086	1	0	0	1	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0087	1	1	0	0	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0088	1	1	0	0	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0089	1	0	0	1	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0090	1	1	0	0	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0091	1	1	0	0	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0092	1	1	0	0	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0093	1	0	0	1	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0094	1	0	0	1	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0095	1	0	0	1	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0096	1	1	0	0	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0097	1	0	1	0	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0098	1	1	0	0	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0099	1	0	1	0	0	0	ZBTB48	chr1	6574994	6594280
ZBTB48_chr1_6574994_6594280	0/0	g0100	1	1	0	0	0	0	ZBTB48	chr1	6574994	6594280
ZBTB49_chr4_4285251_4326783	0/0	g0001	21	0	0	18	0	3	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0002	11	0	0	10	0	1	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0003	7	1	0	6	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0004	6	0	3	1	1	1	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0005	5	5	0	0	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0006	5	0	5	0	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0007	5	0	0	5	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0008	4	0	2	2	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0009	4	0	0	4	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0010	4	0	0	4	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0011	4	0	0	4	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0012	4	0	1	0	2	1	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0013	4	0	0	4	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0014	3	3	0	0	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0015	3	0	0	3	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0016	3	0	0	3	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0017	3	0	3	0	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0018	3	0	0	3	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0019	3	0	0	3	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0020	3	0	0	3	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0021	3	3	0	0	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0022	3	0	2	0	1	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0023	2	2	0	0	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0024	2	0	0	2	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0025	2	0	0	1	0	1	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0026	2	0	1	1	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0027	2	0	0	1	1	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0028	2	0	1	0	1	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0029	2	0	2	0	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0030	2	2	0	0	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0031	2	0	2	0	0	0	ZBTB49	chr4	4285251	4326783
ZBTB49_chr4_4285251_4326783	0/0	g0032	2	0	0	2	0	0	ZBTB49	chr4	4285251	4326783