JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZBTB4_chr17_7454378_7484631	0/0	g0281	1	1	0	0	0	0	ZBTB4	chr17	7454378	7484631
ZBTB4_chr17_7454378_7484631	0/0	g0282	1	0	1	0	0	0	ZBTB4	chr17	7454378	7484631
ZBTB4_chr17_7454378_7484631	0/0	g0283	1	1	0	0	0	0	ZBTB4	chr17	7454378	7484631
ZBTB4_chr17_7454378_7484631	0/0	g0284	1	1	0	0	0	0	ZBTB4	chr17	7454378	7484631
ZBTB4_chr17_7454378_7484631	0/0	g0285	1	0	0	1	0	0	ZBTB4	chr17	7454378	7484631
ZBTB4_chr17_7454378_7484631	0/0	g0286	1	0	0	1	0	0	ZBTB4	chr17	7454378	7484631
ZBTB4_chr17_7454378_7484631	0/0	g0287	1	0	0	1	0	0	ZBTB4	chr17	7454378	7484631
ZBTB4_chr17_7454378_7484631	0/0	g0288	1	0	0	1	0	0	ZBTB4	chr17	7454378	7484631
ZBTB4_chr17_7454378_7484631	0/0	g0289	1	0	0	1	0	0	ZBTB4	chr17	7454378	7484631
ZBTB4_chr17_7454378_7484631	0/0	g0290	1	0	0	1	0	0	ZBTB4	chr17	7454378	7484631
ZBTB4_chr17_7454378_7484631	0/0	g0291	1	0	0	1	0	0	ZBTB4	chr17	7454378	7484631
ZBTB4_chr17_7454378_7484631	0/0	g0292	1	0	0	1	0	0	ZBTB4	chr17	7454378	7484631
ZBTB4_chr17_7454378_7484631	0/0	g0293	1	0	0	1	0	0	ZBTB4	chr17	7454378	7484631
ZBTB4_chr17_7454378_7484631	0/0	g0294	1	0	0	1	0	0	ZBTB4	chr17	7454378	7484631
ZBTB5_chr9_37433102_37470450	0/0	g0001	26	0	1	19	1	5	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0002	17	2	3	11	0	1	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0003	11	10	1	0	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0004	9	0	1	7	0	1	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0005	9	0	3	6	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0006	8	0	5	0	1	2	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0007	7	1	0	6	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0008	7	1	3	0	1	2	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0009	7	0	3	0	0	4	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0010	6	0	4	0	1	1	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0011	6	0	6	0	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0012	5	5	0	0	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0013	5	5	0	0	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0014	5	0	0	5	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0015	5	0	0	5	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0016	5	0	2	3	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0017	5	0	2	0	1	2	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0018	4	0	0	3	1	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0019	4	3	1	0	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0020	4	0	0	4	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0021	3	2	1	0	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0022	3	0	0	2	0	1	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0023	3	0	0	3	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0024	3	0	0	0	0	3	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0025	3	0	1	0	0	2	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0026	3	0	0	3	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0027	3	0	0	3	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0028	3	2	1	0	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0029	3	0	0	3	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0030	3	0	0	3	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0031	3	0	1	1	0	1	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/1	g0032	3	0	0	1	1	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0033	2	0	0	2	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0034	2	2	0	0	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0035	2	2	0	0	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0036	2	2	0	0	0	0	ZBTB5	chr9	37433102	37470450