JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZBTB5_chr9_37433102_37470450	0/0	g0187	1	0	0	1	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0188	1	0	0	1	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0189	1	0	0	0	1	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0190	1	0	0	1	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0191	1	0	1	0	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0192	1	1	0	0	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0193	1	1	0	0	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0194	1	1	0	0	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0195	1	1	0	0	0	0	ZBTB5	chr9	37433102	37470450
ZBTB5_chr9_37433102_37470450	0/0	g0196	1	0	0	1	0	0	ZBTB5	chr9	37433102	37470450
ZBTB6_chr9_122903056_122918323	0/1	g0001	150	36	34	43	11	25	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0002	127	17	19	87	1	3	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0003	23	0	1	18	2	2	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0004	15	10	4	0	1	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	1/0	g0005	13	11	1	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0006	12	0	0	12	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0007	11	0	2	9	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0008	5	4	1	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0009	5	0	1	0	0	4	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0010	3	3	0	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0011	3	0	0	3	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0012	3	3	0	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0013	2	0	0	0	2	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0014	2	2	0	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0015	2	0	2	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0016	2	0	0	2	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0017	2	0	1	0	1	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0018	2	0	2	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0019	2	2	0	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0020	2	1	1	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0021	2	0	0	2	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0022	1	1	0	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0023	1	0	1	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0024	1	1	0	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0025	1	0	1	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0026	1	0	1	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0027	1	0	0	1	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0028	1	0	1	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0029	1	0	0	1	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0030	1	0	0	1	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0031	1	0	0	1	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0032	1	1	0	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0033	1	0	0	1	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0034	1	0	0	1	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0035	1	0	0	1	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0036	1	0	1	0	0	0	ZBTB6	chr9	122903056	122918323
ZBTB6_chr9_122903056_122918323	0/0	g0037	1	0	0	1	0	0	ZBTB6	chr9	122903056	122918323
ZBTB7A_chr19_4038303_4071899	0/0	g0001	3	3	0	0	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0002	2	0	1	0	1	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0003	2	0	2	0	0	0	ZBTB7A	chr19	4038303	4071899