JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZBTB7A_chr19_4038303_4071899	0/0	g0254	1	1	0	0	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0255	1	1	0	0	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0256	1	1	0	0	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0257	1	1	0	0	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0258	1	0	0	1	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0259	1	0	0	1	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0260	1	0	0	0	0	1	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0261	1	0	0	0	0	1	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0262	1	1	0	0	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0263	1	1	0	0	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0264	1	1	0	0	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0265	1	0	0	1	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0266	1	1	0	0	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0267	1	0	0	0	0	1	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0268	1	0	1	0	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0269	1	0	0	1	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0270	1	0	0	1	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7A_chr19_4038303_4071899	0/0	g0271	1	0	0	1	0	0	ZBTB7A	chr19	4038303	4071899
ZBTB7B_chr1_154997802_155023523	0/0	g0001	57	1	12	27	5	12	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0002	20	1	5	12	0	2	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0003	11	5	0	4	0	2	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0004	10	0	8	2	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0005	9	9	0	0	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0006	9	9	0	0	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0007	9	1	4	0	3	1	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0008	8	0	4	0	1	3	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0009	8	0	0	7	0	1	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0010	7	0	2	5	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0011	7	1	5	0	0	1	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0012	5	4	1	0	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0013	5	5	0	0	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0014	5	0	0	5	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0015	5	0	0	1	0	4	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0016	5	0	2	3	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0017	4	3	1	0	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0018	4	0	4	0	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0019	4	0	0	4	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0020	4	1	1	0	0	2	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0021	4	3	1	0	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	1/0	g0022	4	1	0	2	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0023	4	4	0	0	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0024	3	3	0	0	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0025	3	0	0	3	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0026	3	1	1	0	0	1	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0027	3	1	1	0	0	1	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0028	3	1	0	0	0	2	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0029	3	0	0	3	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0030	3	0	0	3	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0031	3	3	0	0	0	0	ZBTB7B	chr1	154997802	155023523
ZBTB7B_chr1_154997802_155023523	0/0	g0032	2	0	1	1	0	0	ZBTB7B	chr1	154997802	155023523