JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZCCHC9_chr5_81296587_81318297	0/0	g0153	1	0	0	1	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0154	1	0	0	0	0	1	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0155	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0156	1	0	0	0	0	1	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0157	1	0	0	1	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0158	1	0	0	0	0	1	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0159	1	0	1	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0160	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0161	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0162	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0163	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0164	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0165	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0166	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0167	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0168	1	0	0	1	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0169	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0170	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0171	1	0	0	1	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0172	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0173	1	0	0	1	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0174	1	0	0	1	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0175	1	0	0	1	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0176	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0177	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0178	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0179	1	1	0	0	0	0	ZCCHC9	chr5	81296587	81318297
ZCCHC9_chr5_81296587_81318297	0/0	g0180	1	0	0	0	1	0	ZCCHC9	chr5	81296587	81318297
ZCRB1_chr12_42307086_42331094	0/0	g0001	41	5	8	25	1	2	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0002	34	4	5	14	2	9	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0003	26	0	4	15	1	6	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0004	25	0	8	15	1	1	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/1	g0005	23	1	7	9	2	3	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0006	16	2	3	11	0	0	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0007	13	0	0	13	0	0	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0008	12	2	4	5	0	1	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0009	10	3	1	6	0	0	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0010	9	3	1	1	2	2	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0011	6	5	1	0	0	0	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0012	6	0	1	4	0	1	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0013	6	0	0	6	0	0	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0014	5	0	0	5	0	0	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0015	4	0	4	0	0	0	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0016	4	0	0	1	0	3	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0017	4	4	0	0	0	0	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0018	4	3	0	1	0	0	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0019	4	4	0	0	0	0	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0020	3	0	1	1	0	1	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0021	3	3	0	0	0	0	ZCRB1	chr12	42307086	42331094
ZCRB1_chr12_42307086_42331094	0/0	g0022	3	3	0	0	0	0	ZCRB1	chr12	42307086	42331094