JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZDHHC21_chr9_14606071_14698432	0/0	g0358	1	0	0	1	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0359	1	0	0	0	0	1	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0360	1	0	0	1	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0361	1	0	0	1	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0362	1	0	0	1	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0363	1	0	0	1	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0364	1	0	0	1	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0365	1	0	0	1	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0366	1	0	0	1	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0367	1	0	0	1	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0368	1	0	0	1	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0369	1	1	0	0	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0370	1	1	0	0	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0371	1	0	1	0	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0372	1	0	1	0	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0373	1	1	0	0	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0374	1	1	0	0	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0375	1	1	0	0	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0376	1	1	0	0	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0377	1	0	0	0	0	1	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0378	1	0	0	1	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC21_chr9_14606071_14698432	0/0	g0379	1	0	0	1	0	0	ZDHHC21	chr9	14606071	14698432
ZDHHC22_chr14_77126270_77146791	0/0	g0001	18	0	2	16	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/1	g0002	7	0	0	5	0	1	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0003	7	0	0	7	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0004	7	0	0	7	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0005	6	0	1	5	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0006	5	5	0	0	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0007	5	0	0	5	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0008	5	0	0	1	0	4	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0009	4	0	2	0	0	2	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0010	4	0	2	2	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0011	4	2	0	1	0	1	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0012	4	0	4	0	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0013	4	0	0	4	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0014	4	1	3	0	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0015	4	0	0	3	1	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0016	4	0	2	0	1	1	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0017	4	0	0	4	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0018	4	0	0	4	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0019	3	0	0	3	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0020	3	0	0	3	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0021	3	0	0	2	0	1	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0022	3	0	0	3	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0023	3	3	0	0	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0024	3	0	3	0	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0025	3	3	0	0	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0026	3	0	2	1	0	0	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0027	3	0	2	0	0	1	ZDHHC22	chr14	77126270	77146791
ZDHHC22_chr14_77126270_77146791	0/0	g0028	3	0	0	3	0	0	ZDHHC22	chr14	77126270	77146791