JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZFHX4_chr8_76676247_76872281	0/0	g0222	1	1	0	0	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0223	1	1	0	0	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0224	1	0	0	1	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0225	1	0	0	1	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0226	1	0	0	1	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0227	1	0	0	1	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0228	1	0	0	1	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0229	1	0	0	1	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0230	1	1	0	0	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0231	1	0	0	1	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0232	1	0	0	1	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0233	1	0	0	1	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0234	1	0	0	1	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0235	1	0	0	0	0	1	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0236	1	0	1	0	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	1/0	g0237	1	0	0	0	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0238	1	1	0	0	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0239	1	1	0	0	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0240	1	1	0	0	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0241	1	1	0	0	0	0	ZFHX4	chr8	76676247	76872281
ZFHX4_chr8_76676247_76872281	0/0	g0242	1	0	0	0	0	1	ZFHX4	chr8	76676247	76872281
ZFP14_chr19_36329453_36384201	0/0	g0001	7	0	0	7	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0002	6	2	2	0	0	2	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0003	6	0	0	4	2	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	1/0	g0004	5	0	0	4	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0005	4	0	0	4	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0006	3	3	0	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0007	3	3	0	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0008	3	0	3	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0009	2	0	0	0	0	2	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0010	2	2	0	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0011	2	2	0	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0012	2	2	0	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0013	2	2	0	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0014	2	0	0	2	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0015	2	2	0	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0016	2	2	0	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0017	2	2	0	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0018	2	0	0	2	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0019	2	0	0	2	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0020	2	0	2	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0021	2	0	0	2	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0022	2	0	2	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0023	2	2	0	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0024	2	1	1	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0025	2	0	2	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0026	1	1	0	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0027	1	0	0	0	0	1	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0028	1	1	0	0	0	0	ZFP14	chr19	36329453	36384201
ZFP14_chr19_36329453_36384201	0/0	g0029	1	0	0	0	0	1	ZFP14	chr19	36329453	36384201