JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZFP1_chr16_75143524_75177234	0/0	g0308	1	1	0	0	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0309	1	1	0	0	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0310	1	1	0	0	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0311	1	1	0	0	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0312	1	1	0	0	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0313	1	1	0	0	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0314	1	1	0	0	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0315	1	1	0	0	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0316	1	1	0	0	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0317	1	1	0	0	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0318	1	0	0	1	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0319	1	0	0	1	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0320	1	0	0	1	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0321	1	0	0	0	1	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0322	1	1	0	0	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0323	1	1	0	0	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0324	1	1	0	0	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0325	1	1	0	0	0	0	ZFP1	chr16	75143524	75177234
ZFP1_chr16_75143524_75177234	0/0	g0326	1	1	0	0	0	0	ZFP1	chr16	75143524	75177234
ZFP28_chr19_56533948_56561808	0/0	g0001	43	10	2	31	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0002	33	2	7	22	1	1	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0003	23	4	7	5	2	5	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0004	22	0	0	19	0	3	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0005	20	0	5	12	0	3	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/1	g0006	9	1	1	4	2	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0007	8	0	3	2	1	2	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0008	7	6	0	1	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0009	6	0	2	3	1	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0010	6	0	5	1	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0011	6	0	0	6	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0012	6	0	0	6	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0013	5	0	0	4	0	1	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0014	5	0	3	2	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0015	5	4	1	0	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0016	4	0	3	0	1	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0017	4	4	0	0	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0018	4	4	0	0	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0019	4	0	0	4	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0020	4	0	3	0	0	1	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0021	4	0	0	2	1	1	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0022	4	0	0	4	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0023	3	0	2	1	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0024	3	2	1	0	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0025	3	0	0	3	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0026	3	3	0	0	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0027	3	3	0	0	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0028	3	3	0	0	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0029	3	2	1	0	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0030	3	0	3	0	0	0	ZFP28	chr19	56533948	56561808
ZFP28_chr19_56533948_56561808	0/0	g0031	3	0	3	0	0	0	ZFP28	chr19	56533948	56561808