JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZFP36L1_chr14_68782662_68798067	0/0	g0050	1	0	0	1	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0051	1	0	0	1	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0052	1	0	0	1	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0053	1	0	0	1	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0054	1	0	0	1	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0055	1	0	0	1	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0056	1	0	0	1	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0057	1	0	1	0	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0058	1	0	0	1	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0059	1	0	0	1	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0060	1	0	0	1	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0061	1	0	0	1	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0062	1	1	0	0	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0063	1	0	0	1	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0064	1	1	0	0	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0065	1	1	0	0	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0066	1	1	0	0	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0067	1	0	1	0	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0068	1	0	0	0	1	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0069	1	0	0	0	1	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0070	1	1	0	0	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0071	1	1	0	0	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0072	1	0	0	0	0	1	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0073	1	1	0	0	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L1_chr14_68782662_68798067	0/0	g0074	1	1	0	0	0	0	ZFP36L1	chr14	68782662	68798067
ZFP36L2_chr2_43217402_43231606	1/1	g0001	145	10	27	93	2	11	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0002	61	13	8	34	2	4	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0003	23	2	9	0	4	8	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0004	15	13	2	0	0	0	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0005	13	1	2	10	0	0	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0006	11	8	1	0	1	1	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0007	8	7	1	0	0	0	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0008	7	0	2	4	0	1	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0009	7	0	0	7	0	0	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0010	7	7	0	0	0	0	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0011	6	6	0	0	0	0	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0012	6	0	5	0	0	1	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0013	5	0	0	5	0	0	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0014	5	5	0	0	0	0	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0015	5	5	0	0	0	0	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0016	5	0	4	0	0	1	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0017	5	0	0	5	0	0	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0018	5	5	0	0	0	0	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0019	4	0	2	0	0	2	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0020	4	0	0	1	0	3	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0021	4	1	0	3	0	0	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0022	4	0	0	4	0	0	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0023	3	0	0	0	0	3	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0024	3	3	0	0	0	0	ZFP36L2	chr2	43217402	43231606
ZFP36L2_chr2_43217402_43231606	0/0	g0025	3	0	3	0	0	0	ZFP36L2	chr2	43217402	43231606