JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZFP36L2_chr2_43217402_43231606	0/0	g0076	1	0	0	0	1	0	ZFP36L2	chr2	43217402	43231606
ZFP36_chr19_39401847_39414407	1/1	g0001	396	87	76	175	18	38	ZFP36	chr19	39401847	39414407
ZFP36_chr19_39401847_39414407	0/0	g0002	5	0	0	0	0	5	ZFP36	chr19	39401847	39414407
ZFP36_chr19_39401847_39414407	0/0	g0003	2	2	0	0	0	0	ZFP36	chr19	39401847	39414407
ZFP36_chr19_39401847_39414407	0/0	g0004	1	1	0	0	0	0	ZFP36	chr19	39401847	39414407
ZFP36_chr19_39401847_39414407	0/0	g0005	1	0	0	0	0	1	ZFP36	chr19	39401847	39414407
ZFP36_chr19_39401847_39414407	0/0	g0006	1	0	0	1	0	0	ZFP36	chr19	39401847	39414407
ZFP37_chr9_113033377_113061724	0/0	g0001	22	0	3	14	0	5	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0002	21	4	6	8	0	3	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	1/0	g0003	19	6	4	4	1	3	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0004	16	1	11	0	3	1	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0005	14	0	0	12	0	2	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0006	14	13	1	0	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0007	13	0	0	11	0	2	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0008	11	0	0	11	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0009	10	0	0	10	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0010	10	0	4	0	3	3	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0011	10	0	0	10	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0012	9	0	0	9	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0013	6	0	0	2	0	4	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0014	6	4	1	0	0	1	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0015	5	0	0	5	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0016	5	0	2	3	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0017	5	0	0	5	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0018	5	0	1	4	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0019	5	5	0	0	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0020	5	0	5	0	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0021	4	0	4	0	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0022	4	0	0	4	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0023	4	1	2	1	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0024	4	3	1	0	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0025	4	0	2	2	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0026	3	3	0	0	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0027	3	0	0	3	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0028	3	0	0	3	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0029	3	0	0	3	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0030	3	0	0	3	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0031	3	0	0	0	0	3	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0032	3	0	0	3	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0033	3	0	0	3	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0034	3	1	2	0	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0035	3	3	0	0	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0036	3	0	0	3	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0037	3	0	2	0	1	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0038	3	1	2	0	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0039	2	2	0	0	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0040	2	0	0	2	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0041	2	0	2	0	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0042	2	0	0	2	0	0	ZFP37	chr9	113033377	113061724
ZFP37_chr9_113033377_113061724	0/0	g0043	2	0	0	2	0	0	ZFP37	chr9	113033377	113061724