JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZFP41_chr8_143241939_143267705	0/0	g0090	1	0	1	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0091	1	0	0	0	1	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0092	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0093	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0094	1	0	0	1	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0095	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0096	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0097	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0098	1	0	0	1	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0099	1	0	1	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0100	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0101	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0102	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0103	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0104	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0105	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0106	1	0	0	0	0	1	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0107	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0108	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0109	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0110	1	0	0	1	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0111	1	0	1	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0112	1	0	0	1	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0113	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0114	1	0	0	0	0	1	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0115	1	0	1	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0116	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0117	1	0	1	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0118	1	1	0	0	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0119	1	0	0	0	0	1	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0120	1	0	0	1	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0121	1	0	0	1	0	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0122	1	0	0	0	1	0	ZFP41	chr8	143241939	143267705
ZFP41_chr8_143241939_143267705	0/0	g0123	1	0	0	1	0	0	ZFP41	chr8	143241939	143267705
ZFP42_chr4_187990771_188010046	0/0	g0001	57	3	16	34	0	4	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0002	20	2	1	16	0	1	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0003	16	0	2	13	0	1	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0004	16	0	0	15	0	1	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	1/0	g0005	15	1	6	0	6	1	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0006	11	0	0	8	0	3	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0007	11	2	4	4	0	1	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0008	10	0	4	6	0	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0009	9	1	1	6	0	1	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0010	8	0	0	3	1	4	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0011	7	0	4	2	0	1	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0012	6	0	0	6	0	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0013	6	6	0	0	0	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0014	6	5	1	0	0	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0015	5	0	1	4	0	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0016	5	1	2	2	0	0	ZFP42	chr4	187990771	188010046