JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZFP42_chr4_187990771_188010046	0/0	g0167	1	0	0	0	1	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0168	1	0	1	0	0	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0169	1	0	0	0	0	1	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0170	1	0	0	0	0	1	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0171	1	0	1	0	0	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0172	1	0	1	0	0	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0173	1	0	1	0	0	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0174	1	0	0	0	0	1	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0175	1	1	0	0	0	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0176	1	1	0	0	0	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0177	1	1	0	0	0	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0178	1	1	0	0	0	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0179	1	1	0	0	0	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0180	1	1	0	0	0	0	ZFP42	chr4	187990771	188010046
ZFP42_chr4_187990771_188010046	0/0	g0181	1	1	0	0	0	0	ZFP42	chr4	187990771	188010046
ZFP57_chr6_29667483_29686152	0/0	g0001	25	1	13	0	2	9	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0002	25	0	7	17	1	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0003	22	0	0	20	2	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0004	22	9	0	13	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0005	16	0	4	12	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0006	15	2	0	12	0	1	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0007	13	0	0	12	0	1	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0008	13	3	0	8	0	2	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0009	10	0	0	10	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/1	g0010	10	1	1	3	0	4	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0011	8	0	4	3	1	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0012	8	7	0	0	0	1	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0013	8	0	0	8	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0014	8	0	0	7	0	1	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0015	8	1	0	7	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0016	8	0	7	1	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0017	7	6	1	0	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0018	6	4	2	0	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0019	6	0	1	2	0	3	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0020	6	2	4	0	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0021	6	0	3	2	1	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0022	5	2	1	2	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0023	5	0	5	0	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0024	5	0	0	2	1	2	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0025	4	4	0	0	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0026	4	0	2	1	1	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0027	4	1	0	2	0	1	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0028	4	0	2	2	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0029	4	0	0	4	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0030	4	0	1	2	0	1	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0031	3	3	0	0	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0032	3	2	0	0	1	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0033	3	3	0	0	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0034	3	0	0	3	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0035	3	0	0	3	0	0	ZFP57	chr6	29667483	29686152