JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZFP57_chr6_29667483_29686152	0/0	g0136	1	1	0	0	0	0	ZFP57	chr6	29667483	29686152
ZFP57_chr6_29667483_29686152	0/0	g0137	1	0	0	1	0	0	ZFP57	chr6	29667483	29686152
ZFP62_chr5_180842611_180866276	0/0	g0001	59	0	8	47	0	4	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0002	42	5	6	21	5	5	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0003	37	2	13	16	0	6	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0004	18	0	0	16	0	2	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0005	12	10	2	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0006	10	0	9	0	0	1	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0007	9	0	0	7	0	2	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0008	8	0	0	8	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0009	7	0	0	7	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0010	6	6	0	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0011	5	5	0	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0012	5	5	0	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0013	4	0	3	0	0	1	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0014	4	4	0	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0015	4	0	1	0	0	3	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0016	4	3	1	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0017	4	2	0	1	1	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0018	3	0	2	0	1	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0019	3	0	2	0	1	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0020	3	2	1	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0021	3	1	2	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/1	g0022	3	0	1	0	0	1	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0023	3	0	1	2	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0024	3	2	1	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0025	2	2	0	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0026	2	2	0	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0027	2	1	1	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	1/0	g0028	2	1	0	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0029	2	1	0	0	1	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0030	2	1	0	0	0	1	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0031	2	0	0	1	0	1	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0032	2	0	0	2	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0033	2	0	0	2	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0034	2	0	0	2	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0035	2	0	0	2	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0036	2	0	1	0	0	1	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0037	2	2	0	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0038	2	0	0	1	0	1	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0039	2	0	1	1	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0040	2	0	2	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0041	2	0	2	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0042	2	0	0	0	2	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0043	2	2	0	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0044	1	1	0	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0045	1	1	0	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0046	1	1	0	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0047	1	1	0	0	0	0	ZFP62	chr5	180842611	180866276
ZFP62_chr5_180842611_180866276	0/0	g0048	1	1	0	0	0	0	ZFP62	chr5	180842611	180866276