JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZFP92_chrX_153406472_153431481	0/0	g0083	1	0	0	0	0	1	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0084	1	0	0	0	0	1	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0085	1	1	0	0	0	0	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0086	1	1	0	0	0	0	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0087	1	0	0	0	0	1	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0088	1	0	0	1	0	0	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0089	1	1	0	0	0	0	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0090	1	0	0	0	0	1	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0091	1	0	1	0	0	0	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0092	1	0	1	0	0	0	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0093	1	0	0	0	0	1	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0094	1	1	0	0	0	0	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0095	1	1	0	0	0	0	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0096	1	0	0	0	0	1	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0097	1	1	0	0	0	0	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0098	1	1	0	0	0	0	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0099	1	1	0	0	0	0	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0100	1	1	0	0	0	0	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0101	1	1	0	0	0	0	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/1	g0102	1	0	0	0	0	0	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0103	1	0	0	1	0	0	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0104	1	0	0	0	0	1	ZFP92	chrX	153406472	153431481
ZFP92_chrX_153406472_153431481	0/0	g0105	1	0	0	1	0	0	ZFP92	chrX	153406472	153431481
ZFPL1_chr11_65079222_65093398	0/1	g0001	284	57	65	118	16	27	ZFPL1	chr11	65079222	65093398
ZFPL1_chr11_65079222_65093398	1/0	g0002	52	16	8	14	1	12	ZFPL1	chr11	65079222	65093398
ZFPL1_chr11_65079222_65093398	0/0	g0003	11	1	1	8	0	1	ZFPL1	chr11	65079222	65093398
ZFPL1_chr11_65079222_65093398	0/0	g0004	10	9	1	0	0	0	ZFPL1	chr11	65079222	65093398
ZFPL1_chr11_65079222_65093398	0/0	g0005	6	6	0	0	0	0	ZFPL1	chr11	65079222	65093398
ZFPL1_chr11_65079222_65093398	0/0	g0006	2	2	0	0	0	0	ZFPL1	chr11	65079222	65093398
ZFPL1_chr11_65079222_65093398	0/0	g0007	2	2	0	0	0	0	ZFPL1	chr11	65079222	65093398
ZFPL1_chr11_65079222_65093398	0/0	g0008	2	1	1	0	0	0	ZFPL1	chr11	65079222	65093398
ZFPL1_chr11_65079222_65093398	0/0	g0009	1	1	0	0	0	0	ZFPL1	chr11	65079222	65093398
ZFPL1_chr11_65079222_65093398	0/0	g0010	1	1	0	0	0	0	ZFPL1	chr11	65079222	65093398
ZFPL1_chr11_65079222_65093398	0/0	g0011	1	1	0	0	0	0	ZFPL1	chr11	65079222	65093398
ZFPL1_chr11_65079222_65093398	0/0	g0012	1	1	0	0	0	0	ZFPL1	chr11	65079222	65093398
ZFPL1_chr11_65079222_65093398	0/0	g0013	1	0	0	1	0	0	ZFPL1	chr11	65079222	65093398
ZFPL1_chr11_65079222_65093398	0/0	g0014	1	0	0	0	1	0	ZFPL1	chr11	65079222	65093398
ZFPL1_chr11_65079222_65093398	0/0	g0015	1	0	0	1	0	0	ZFPL1	chr11	65079222	65093398
ZFPM1_chr16_88448280_88542031	0/0	g0001	3	0	0	3	0	0	ZFPM1	chr16	88448280	88542031
ZFPM1_chr16_88448280_88542031	0/0	g0002	2	0	2	0	0	0	ZFPM1	chr16	88448280	88542031
ZFPM1_chr16_88448280_88542031	0/0	g0003	2	0	0	0	0	2	ZFPM1	chr16	88448280	88542031
ZFPM1_chr16_88448280_88542031	0/0	g0004	2	2	0	0	0	0	ZFPM1	chr16	88448280	88542031
ZFPM1_chr16_88448280_88542031	0/0	g0005	2	0	2	0	0	0	ZFPM1	chr16	88448280	88542031
ZFPM1_chr16_88448280_88542031	0/0	g0006	1	0	1	0	0	0	ZFPM1	chr16	88448280	88542031
ZFPM1_chr16_88448280_88542031	0/0	g0007	1	1	0	0	0	0	ZFPM1	chr16	88448280	88542031
ZFPM1_chr16_88448280_88542031	0/0	g0008	1	0	0	0	0	1	ZFPM1	chr16	88448280	88542031
ZFPM1_chr16_88448280_88542031	0/0	g0009	1	0	0	1	0	0	ZFPM1	chr16	88448280	88542031
ZFPM1_chr16_88448280_88542031	0/0	g0010	1	0	0	1	0	0	ZFPM1	chr16	88448280	88542031
ZFPM1_chr16_88448280_88542031	0/0	g0011	1	0	0	0	1	0	ZFPM1	chr16	88448280	88542031
ZFPM1_chr16_88448280_88542031	0/0	g0012	1	0	0	0	1	0	ZFPM1	chr16	88448280	88542031