JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZFYVE1_chr14_72964451_73032106	0/0	g0342	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0343	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0344	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0345	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0346	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0347	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0348	1	0	1	0	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0349	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0350	1	0	1	0	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0351	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0352	1	0	0	0	0	1	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0353	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0354	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0355	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0356	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0357	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0358	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0359	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0360	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0361	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0362	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0363	1	0	0	0	0	1	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0364	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0365	1	1	0	0	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0366	1	0	0	1	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0367	1	0	1	0	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0368	1	0	1	0	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0369	1	0	1	0	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0370	1	0	1	0	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0371	1	0	1	0	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE1_chr14_72964451_73032106	0/0	g0372	1	0	1	0	0	0	ZFYVE1	chr14	72964451	73032106
ZFYVE21_chr14_103710810_103738664	0/0	g0001	22	2	4	9	2	5	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0002	14	1	0	8	1	4	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0003	9	0	2	7	0	0	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0004	8	0	5	3	0	0	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0005	7	0	0	5	0	2	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0006	6	0	0	6	0	0	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0007	6	1	5	0	0	0	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0008	5	0	0	5	0	0	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0009	5	0	5	0	0	0	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0010	5	0	0	5	0	0	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0011	5	5	0	0	0	0	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0012	5	0	3	0	1	1	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0013	4	0	0	4	0	0	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0014	4	0	4	0	0	0	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0015	4	4	0	0	0	0	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0016	4	0	0	4	0	0	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0017	3	0	1	2	0	0	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0018	3	0	3	0	0	0	ZFYVE21	chr14	103710810	103738664
ZFYVE21_chr14_103710810_103738664	0/0	g0019	3	0	2	0	0	1	ZFYVE21	chr14	103710810	103738664