JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZGRF1_chr4_112534339_112641909	0/0	g0346	1	0	0	1	0	0	ZGRF1	chr4	112534339	112641909
ZGRF1_chr4_112534339_112641909	0/0	g0347	1	1	0	0	0	0	ZGRF1	chr4	112534339	112641909
ZGRF1_chr4_112534339_112641909	0/0	g0348	1	1	0	0	0	0	ZGRF1	chr4	112534339	112641909
ZGRF1_chr4_112534339_112641909	0/0	g0349	1	1	0	0	0	0	ZGRF1	chr4	112534339	112641909
ZGRF1_chr4_112534339_112641909	0/0	g0350	1	0	0	1	0	0	ZGRF1	chr4	112534339	112641909
ZGRF1_chr4_112534339_112641909	0/0	g0351	1	0	0	1	0	0	ZGRF1	chr4	112534339	112641909
ZGRF1_chr4_112534339_112641909	0/0	g0352	1	0	0	1	0	0	ZGRF1	chr4	112534339	112641909
ZGRF1_chr4_112534339_112641909	0/0	g0353	1	0	0	0	0	1	ZGRF1	chr4	112534339	112641909
ZGRF1_chr4_112534339_112641909	0/0	g0354	1	0	0	0	1	0	ZGRF1	chr4	112534339	112641909
ZGRF1_chr4_112534339_112641909	0/0	g0355	1	0	1	0	0	0	ZGRF1	chr4	112534339	112641909
ZGRF1_chr4_112534339_112641909	0/0	g0356	1	0	0	0	0	1	ZGRF1	chr4	112534339	112641909
ZGRF1_chr4_112534339_112641909	0/0	g0357	1	0	0	0	0	1	ZGRF1	chr4	112534339	112641909
ZGRF1_chr4_112534339_112641909	0/0	g0358	1	1	0	0	0	0	ZGRF1	chr4	112534339	112641909
ZGRF1_chr4_112534339_112641909	0/0	g0359	1	1	0	0	0	0	ZGRF1	chr4	112534339	112641909
ZGRF1_chr4_112534339_112641909	0/0	g0360	1	1	0	0	0	0	ZGRF1	chr4	112534339	112641909
ZHX1_chr8_123243456_123279286	0/0	g0001	35	5	7	16	0	7	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0002	19	0	3	10	2	4	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0003	10	2	5	1	1	1	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0004	9	0	0	8	0	1	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0005	8	0	0	7	0	1	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0006	7	1	1	4	0	1	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0007	5	5	0	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0008	4	0	2	0	0	2	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0009	4	4	0	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0010	4	4	0	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0011	4	0	4	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0012	4	4	0	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0013	3	2	1	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0014	3	0	0	3	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0015	3	0	1	1	0	1	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0016	3	0	0	3	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0017	3	0	2	0	0	1	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0018	2	0	2	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0019	2	1	1	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0020	2	0	1	0	1	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0021	2	2	0	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0022	2	2	0	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0023	2	1	1	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0024	2	0	1	0	0	1	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0025	2	2	0	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0026	2	2	0	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0027	2	2	0	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0028	2	0	2	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0029	2	0	0	2	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0030	2	2	0	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0031	2	2	0	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0032	1	0	1	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0033	1	0	1	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0034	1	1	0	0	0	0	ZHX1	chr8	123243456	123279286
ZHX1_chr8_123243456_123279286	0/0	g0035	1	1	0	0	0	0	ZHX1	chr8	123243456	123279286