JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF10_chr12_133125627_133164465	0/0	g0225	1	1	0	0	0	0	ZNF10	chr12	133125627	133164465
ZNF10_chr12_133125627_133164465	0/0	g0226	1	1	0	0	0	0	ZNF10	chr12	133125627	133164465
ZNF10_chr12_133125627_133164465	0/0	g0227	1	1	0	0	0	0	ZNF10	chr12	133125627	133164465
ZNF10_chr12_133125627_133164465	0/0	g0228	1	0	1	0	0	0	ZNF10	chr12	133125627	133164465
ZNF10_chr12_133125627_133164465	0/0	g0229	1	1	0	0	0	0	ZNF10	chr12	133125627	133164465
ZNF10_chr12_133125627_133164465	0/0	g0230	1	0	0	0	0	1	ZNF10	chr12	133125627	133164465
ZNF10_chr12_133125627_133164465	0/0	g0231	1	1	0	0	0	0	ZNF10	chr12	133125627	133164465
ZNF10_chr12_133125627_133164465	0/0	g0232	1	1	0	0	0	0	ZNF10	chr12	133125627	133164465
ZNF10_chr12_133125627_133164465	0/0	g0233	1	1	0	0	0	0	ZNF10	chr12	133125627	133164465
ZNF10_chr12_133125627_133164465	0/0	g0234	1	1	0	0	0	0	ZNF10	chr12	133125627	133164465
ZNF10_chr12_133125627_133164465	0/0	g0235	1	1	0	0	0	0	ZNF10	chr12	133125627	133164465
ZNF10_chr12_133125627_133164465	0/0	g0236	1	1	0	0	0	0	ZNF10	chr12	133125627	133164465
ZNF10_chr12_133125627_133164465	0/0	g0237	1	1	0	0	0	0	ZNF10	chr12	133125627	133164465
ZNF112_chr19_44321555_44361680	0/0	g0001	23	0	5	17	0	1	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0002	21	3	7	10	0	1	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0003	17	5	2	4	1	5	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0004	13	0	7	6	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0005	11	0	1	7	0	3	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0006	7	0	3	1	1	2	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0007	7	0	0	7	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0008	7	0	0	7	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	1/0	g0009	6	0	3	0	1	1	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0010	5	0	0	5	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0011	5	0	0	5	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0012	4	0	0	2	0	2	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0013	4	0	1	2	0	1	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0014	4	4	0	0	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0015	4	4	0	0	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0016	4	1	1	2	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0017	3	3	0	0	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0018	3	0	0	3	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0019	3	0	2	1	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0020	3	0	0	3	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0021	3	0	0	0	0	3	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0022	3	0	0	3	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0023	3	0	1	2	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0024	3	3	0	0	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0025	3	3	0	0	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0026	3	3	0	0	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0027	2	2	0	0	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0028	2	2	0	0	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0029	2	0	0	2	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0030	2	1	1	0	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0031	2	0	0	2	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0032	2	0	0	1	0	1	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0033	2	0	1	0	1	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0034	2	0	0	0	2	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0035	2	0	0	0	1	1	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0036	2	1	1	0	0	0	ZNF112	chr19	44321555	44361680
ZNF112_chr19_44321555_44361680	0/0	g0037	2	1	1	0	0	0	ZNF112	chr19	44321555	44361680