JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF131_chr5_43115914_43181322	0/0	g0320	1	1	0	0	0	0	ZNF131	chr5	43115914	43181322
ZNF131_chr5_43115914_43181322	0/0	g0321	1	0	0	1	0	0	ZNF131	chr5	43115914	43181322
ZNF131_chr5_43115914_43181322	0/0	g0322	1	1	0	0	0	0	ZNF131	chr5	43115914	43181322
ZNF131_chr5_43115914_43181322	0/0	g0323	1	0	0	1	0	0	ZNF131	chr5	43115914	43181322
ZNF131_chr5_43115914_43181322	0/0	g0324	1	1	0	0	0	0	ZNF131	chr5	43115914	43181322
ZNF131_chr5_43115914_43181322	0/0	g0325	1	1	0	0	0	0	ZNF131	chr5	43115914	43181322
ZNF131_chr5_43115914_43181322	0/0	g0326	1	1	0	0	0	0	ZNF131	chr5	43115914	43181322
ZNF131_chr5_43115914_43181322	0/0	g0327	1	0	0	1	0	0	ZNF131	chr5	43115914	43181322
ZNF131_chr5_43115914_43181322	0/0	g0328	1	0	0	1	0	0	ZNF131	chr5	43115914	43181322
ZNF131_chr5_43115914_43181322	0/0	g0329	1	0	0	1	0	0	ZNF131	chr5	43115914	43181322
ZNF131_chr5_43115914_43181322	0/0	g0330	1	1	0	0	0	0	ZNF131	chr5	43115914	43181322
ZNF131_chr5_43115914_43181322	0/0	g0331	1	1	0	0	0	0	ZNF131	chr5	43115914	43181322
ZNF131_chr5_43115914_43181322	0/0	g0332	1	1	0	0	0	0	ZNF131	chr5	43115914	43181322
ZNF131_chr5_43115914_43181322	0/0	g0333	1	1	0	0	0	0	ZNF131	chr5	43115914	43181322
ZNF131_chr5_43115914_43181322	0/0	g0334	1	0	1	0	0	0	ZNF131	chr5	43115914	43181322
ZNF132_chr19_58427814_58445153	0/0	g0001	81	15	23	25	4	14	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0002	54	0	9	40	1	4	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/1	g0003	51	1	10	29	5	5	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0004	27	2	11	6	2	6	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0005	21	0	1	19	0	1	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	1/0	g0006	16	0	1	10	2	2	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0007	14	12	1	1	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0008	12	0	0	10	1	1	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0009	12	0	2	10	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0010	8	1	0	6	1	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0011	8	0	0	8	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0012	7	7	0	0	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0013	5	0	0	5	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0014	5	4	0	1	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0015	5	4	0	1	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0016	4	2	2	0	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0017	4	3	1	0	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0018	4	2	1	0	0	1	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0019	3	1	0	1	0	1	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0020	3	3	0	0	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0021	3	0	1	2	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0022	3	2	1	0	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0023	3	3	0	0	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0024	2	0	2	0	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0025	2	0	1	1	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0026	2	0	0	1	1	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0027	2	1	1	0	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0028	2	0	0	0	0	2	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0029	2	0	0	2	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0030	2	2	0	0	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0031	2	0	0	2	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0032	2	0	1	0	0	1	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0033	2	2	0	0	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0034	2	2	0	0	0	0	ZNF132	chr19	58427814	58445153
ZNF132_chr19_58427814_58445153	0/0	g0035	2	1	1	0	0	0	ZNF132	chr19	58427814	58445153