JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF134_chr19_57609242_57629724	0/0	g0018	3	3	0	0	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0019	3	0	2	0	1	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0020	3	0	1	0	2	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0021	2	2	0	0	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0022	2	0	1	0	1	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0023	2	0	2	0	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0024	2	0	0	0	0	2	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0025	2	2	0	0	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0026	1	0	0	1	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0027	1	0	1	0	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0028	1	0	0	0	1	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0029	1	1	0	0	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0030	1	1	0	0	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0031	1	1	0	0	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0032	1	1	0	0	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0033	1	1	0	0	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0034	1	1	0	0	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0035	1	0	0	1	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0036	1	1	0	0	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0037	1	1	0	0	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0038	1	0	0	1	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0039	1	0	0	1	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0040	1	0	0	1	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0041	1	0	0	1	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0042	1	0	0	0	0	1	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0043	1	0	0	1	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0044	1	0	1	0	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0045	1	0	0	1	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0046	1	0	0	1	0	0	ZNF134	chr19	57609242	57629724
ZNF134_chr19_57609242_57629724	0/0	g0047	1	1	0	0	0	0	ZNF134	chr19	57609242	57629724
ZNF135_chr19_58054282_58074755	0/1	g0001	76	15	15	30	6	9	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	1/0	g0002	73	4	10	53	0	5	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0003	36	1	5	24	1	5	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0004	18	10	3	4	1	0	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0005	17	0	10	0	4	3	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0006	16	0	0	15	0	1	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0007	12	0	0	12	0	0	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0008	8	1	2	5	0	0	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0009	8	8	0	0	0	0	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0010	6	0	0	6	0	0	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0011	5	4	1	0	0	0	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0012	5	1	1	3	0	0	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0013	4	0	3	0	1	0	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0014	4	0	4	0	0	0	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0015	3	3	0	0	0	0	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0016	3	3	0	0	0	0	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0017	3	3	0	0	0	0	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0018	3	0	3	0	0	0	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0019	3	3	0	0	0	0	ZNF135	chr19	58054282	58074755
ZNF135_chr19_58054282_58074755	0/0	g0020	3	0	0	3	0	0	ZNF135	chr19	58054282	58074755