JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF154_chr19_57691275_57714204	0/0	g0120	1	0	1	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0121	1	0	0	1	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0122	1	1	0	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0123	1	0	0	1	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0124	1	1	0	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0125	1	1	0	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0126	1	1	0	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0127	1	1	0	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0128	1	0	0	0	0	1	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0129	1	0	0	1	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0130	1	1	0	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0131	1	0	1	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0132	1	0	1	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0133	1	0	1	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0134	1	0	0	0	1	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0135	1	0	0	1	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0136	1	0	0	1	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0137	1	0	0	1	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	1/0	g0138	1	0	0	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0139	1	0	0	0	0	1	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0140	1	0	0	1	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/1	g0141	1	0	0	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0142	1	0	1	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0143	1	0	1	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0144	1	0	0	1	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0145	1	0	1	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0146	1	0	1	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0147	1	0	0	0	0	1	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0148	1	1	0	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0149	1	0	1	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0150	1	1	0	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0151	1	0	0	1	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0152	1	0	0	1	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0153	1	1	0	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0154	1	1	0	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0155	1	1	0	0	0	0	ZNF154	chr19	57691275	57714204
ZNF154_chr19_57691275_57714204	0/0	g0156	1	1	0	0	0	0	ZNF154	chr19	57691275	57714204
ZNF155_chr19_43979188_44003326	0/1	g0001	84	4	32	26	6	15	ZNF155	chr19	43979188	44003326
ZNF155_chr19_43979188_44003326	0/0	g0002	61	0	9	41	3	8	ZNF155	chr19	43979188	44003326
ZNF155_chr19_43979188_44003326	0/0	g0003	34	1	4	24	1	4	ZNF155	chr19	43979188	44003326
ZNF155_chr19_43979188_44003326	0/0	g0004	25	3	2	20	0	0	ZNF155	chr19	43979188	44003326
ZNF155_chr19_43979188_44003326	0/0	g0005	23	0	1	22	0	0	ZNF155	chr19	43979188	44003326
ZNF155_chr19_43979188_44003326	0/0	g0006	15	4	4	2	3	2	ZNF155	chr19	43979188	44003326
ZNF155_chr19_43979188_44003326	0/0	g0007	6	6	0	0	0	0	ZNF155	chr19	43979188	44003326
ZNF155_chr19_43979188_44003326	1/0	g0008	6	5	0	0	0	0	ZNF155	chr19	43979188	44003326
ZNF155_chr19_43979188_44003326	0/0	g0009	5	1	2	0	0	2	ZNF155	chr19	43979188	44003326
ZNF155_chr19_43979188_44003326	0/0	g0010	5	5	0	0	0	0	ZNF155	chr19	43979188	44003326
ZNF155_chr19_43979188_44003326	0/0	g0011	5	0	1	4	0	0	ZNF155	chr19	43979188	44003326
ZNF155_chr19_43979188_44003326	0/0	g0012	4	0	0	0	0	4	ZNF155	chr19	43979188	44003326
ZNF155_chr19_43979188_44003326	0/0	g0013	4	0	0	4	0	0	ZNF155	chr19	43979188	44003326