JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF175_chr19_51566283_51597510	0/0	g0230	1	0	0	0	0	1	ZNF175	chr19	51566283	51597510
ZNF175_chr19_51566283_51597510	0/0	g0231	1	1	0	0	0	0	ZNF175	chr19	51566283	51597510
ZNF175_chr19_51566283_51597510	0/0	g0232	1	0	0	0	0	1	ZNF175	chr19	51566283	51597510
ZNF175_chr19_51566283_51597510	0/0	g0233	1	0	1	0	0	0	ZNF175	chr19	51566283	51597510
ZNF175_chr19_51566283_51597510	0/0	g0234	1	0	0	1	0	0	ZNF175	chr19	51566283	51597510
ZNF175_chr19_51566283_51597510	0/0	g0235	1	0	0	1	0	0	ZNF175	chr19	51566283	51597510
ZNF175_chr19_51566283_51597510	0/0	g0236	1	1	0	0	0	0	ZNF175	chr19	51566283	51597510
ZNF175_chr19_51566283_51597510	0/0	g0237	1	0	1	0	0	0	ZNF175	chr19	51566283	51597510
ZNF175_chr19_51566283_51597510	0/0	g0238	1	1	0	0	0	0	ZNF175	chr19	51566283	51597510
ZNF175_chr19_51566283_51597510	0/0	g0239	1	0	1	0	0	0	ZNF175	chr19	51566283	51597510
ZNF175_chr19_51566283_51597510	0/0	g0240	1	0	0	1	0	0	ZNF175	chr19	51566283	51597510
ZNF175_chr19_51566283_51597510	0/0	g0241	1	1	0	0	0	0	ZNF175	chr19	51566283	51597510
ZNF175_chr19_51566283_51597510	0/0	g0242	1	1	0	0	0	0	ZNF175	chr19	51566283	51597510
ZNF175_chr19_51566283_51597510	0/0	g0243	1	1	0	0	0	0	ZNF175	chr19	51566283	51597510
ZNF175_chr19_51566283_51597510	0/0	g0244	1	0	0	0	0	1	ZNF175	chr19	51566283	51597510
ZNF175_chr19_51566283_51597510	0/0	g0245	1	0	0	0	0	1	ZNF175	chr19	51566283	51597510
ZNF177_chr19_9358013_9387617	0/0	g0001	67	2	15	39	5	6	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0002	47	1	6	39	0	1	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0003	25	0	5	14	2	4	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0004	19	7	3	8	0	1	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0005	18	0	0	17	1	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0006	13	1	9	0	2	1	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0007	12	9	1	1	0	1	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0008	11	0	5	2	0	4	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0009	7	0	1	6	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0010	6	0	4	0	1	1	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0011	6	6	0	0	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0012	6	6	0	0	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0013	6	0	0	6	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0014	5	5	0	0	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0015	4	0	3	0	1	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0016	4	0	0	4	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0017	4	4	0	0	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0018	4	4	0	0	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0019	3	0	0	3	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0020	3	0	0	3	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0021	3	0	1	0	0	2	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0022	3	2	0	1	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0023	3	0	1	0	1	1	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0024	3	3	0	0	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0025	3	3	0	0	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0026	3	3	0	0	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0027	3	3	0	0	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0028	3	3	0	0	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0029	2	1	1	0	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0030	2	0	0	2	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0031	2	1	1	0	0	0	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0032	2	1	0	0	0	1	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0033	2	0	1	0	0	1	ZNF177	chr19	9358013	9387617
ZNF177_chr19_9358013_9387617	0/0	g0034	2	2	0	0	0	0	ZNF177	chr19	9358013	9387617