JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF182_chrX_47969851_48008989	0/0	g0124	1	0	1	0	0	0	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0125	1	0	1	0	0	0	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0126	1	0	0	1	0	0	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0127	1	0	0	1	0	0	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0128	1	1	0	0	0	0	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	1/0	g0129	1	0	0	0	0	0	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0130	1	1	0	0	0	0	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0131	1	1	0	0	0	0	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0132	1	1	0	0	0	0	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0133	1	0	0	1	0	0	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0134	1	0	0	1	0	0	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0135	1	0	1	0	0	0	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0136	1	0	0	0	0	1	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0137	1	0	0	0	0	1	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0138	1	0	0	1	0	0	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0139	1	0	0	1	0	0	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0140	1	0	0	0	0	1	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0141	1	0	0	0	1	0	ZNF182	chrX	47969851	48008989
ZNF182_chrX_47969851_48008989	0/0	g0142	1	1	0	0	0	0	ZNF182	chrX	47969851	48008989
ZNF184_chr6_27445747_27478105	0/0	g0001	49	6	10	27	1	5	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	1/0	g0002	35	0	6	25	1	2	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0003	11	0	1	9	0	1	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0004	10	9	0	0	0	1	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0005	7	0	4	0	2	1	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0006	7	0	0	7	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0007	7	0	1	6	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0008	7	0	1	2	2	2	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0009	7	0	0	7	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0010	6	0	0	6	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/1	g0011	6	1	0	3	0	1	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0012	5	0	0	5	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0013	5	0	2	1	0	2	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0014	4	3	0	1	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0015	3	2	1	0	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0016	3	0	0	0	0	3	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0017	3	3	0	0	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0018	3	3	0	0	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0019	3	2	1	0	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0020	3	2	1	0	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0021	3	0	0	2	0	1	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0022	3	0	2	0	1	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0023	3	0	0	3	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0024	3	0	0	3	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0025	3	0	1	2	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0026	3	0	0	3	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0027	3	2	0	1	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0028	3	0	1	1	0	1	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0029	2	0	2	0	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0030	2	2	0	0	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0031	2	0	2	0	0	0	ZNF184	chr6	27445747	27478105