JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	SAS	genename	chr	start	end
ZNF184_chr6_27445747_27478105	0/0	g0182	1	0	0	0	1	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0183	1	0	0	0	1	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0184	1	1	0	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0185	1	1	0	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0186	1	0	0	1	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0187	1	0	0	1	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0188	1	0	0	1	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0189	1	1	0	0	0	ZNF184	chr6	27445747	27478105
ZNF184_chr6_27445747_27478105	0/0	g0190	1	0	1	0	0	ZNF184	chr6	27445747	27478105
ZNF185_chrX_152893067_152978474	0/0	g0001	7	0	3	3	1	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0002	4	0	3	1	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0003	3	3	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0004	3	0	2	1	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0005	2	1	1	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0006	2	0	0	0	2	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0007	2	0	0	2	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0008	2	0	2	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0009	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0010	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0011	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0012	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0013	1	0	0	0	1	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0014	1	0	0	0	1	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0015	1	0	0	1	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0016	1	0	0	1	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0017	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0018	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0019	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0020	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0021	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0022	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0023	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0024	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0025	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0026	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0027	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0028	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0029	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0030	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0031	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0032	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0033	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0034	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0035	1	0	1	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0036	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0037	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0038	1	1	0	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0039	1	0	1	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0040	1	0	1	0	0	ZNF185	chrX	152893067	152978474
ZNF185_chrX_152893067_152978474	0/0	g0041	1	1	0	0	0	ZNF185	chrX	152893067	152978474