JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF189_chr9_101393851_101415654	0/0	g0099	1	0	0	1	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0100	1	0	0	1	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0101	1	0	0	1	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0102	1	0	0	1	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0103	1	0	0	1	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0104	1	0	1	0	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0105	1	1	0	0	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0106	1	0	0	0	0	1	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0107	1	0	0	0	0	1	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0108	1	0	0	0	0	1	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0109	1	0	0	1	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0110	1	0	0	0	0	1	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0111	1	1	0	0	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0112	1	0	0	1	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0113	1	1	0	0	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0114	1	0	0	1	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0115	1	1	0	0	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0116	1	1	0	0	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0117	1	1	0	0	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0118	1	1	0	0	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0119	1	1	0	0	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0120	1	0	0	1	0	0	ZNF189	chr9	101393851	101415654
ZNF189_chr9_101393851_101415654	0/0	g0121	1	0	0	1	0	0	ZNF189	chr9	101393851	101415654
ZNF18_chr17_11972439_12002475	0/0	g0001	13	0	0	11	1	1	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0002	12	0	3	6	2	1	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0003	12	1	1	10	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0004	12	1	0	10	0	1	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/1	g0005	10	0	3	2	3	1	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0006	9	0	0	9	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0007	7	0	1	6	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0008	6	0	0	6	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0009	5	0	2	2	0	1	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0010	5	0	0	5	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0011	4	0	3	0	0	1	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0012	4	0	3	1	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0013	4	1	1	0	0	2	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	1/0	g0014	4	3	0	0	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0015	4	4	0	0	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0016	4	0	1	3	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0017	4	3	1	0	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0018	3	0	0	3	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0019	3	0	0	3	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0020	3	0	0	3	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0021	3	2	1	0	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0022	3	0	1	0	1	1	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0023	3	0	3	0	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0024	3	0	0	3	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0025	3	3	0	0	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0026	3	3	0	0	0	0	ZNF18	chr17	11972439	12002475
ZNF18_chr17_11972439_12002475	0/0	g0027	3	1	2	0	0	0	ZNF18	chr17	11972439	12002475