JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF195_chr11_3352927_3384146	0/0	g0134	1	0	1	0	0	0	ZNF195	chr11	3352927	3384146
ZNF195_chr11_3352927_3384146	0/0	g0135	1	1	0	0	0	0	ZNF195	chr11	3352927	3384146
ZNF195_chr11_3352927_3384146	0/0	g0136	1	1	0	0	0	0	ZNF195	chr11	3352927	3384146
ZNF195_chr11_3352927_3384146	0/0	g0137	1	1	0	0	0	0	ZNF195	chr11	3352927	3384146
ZNF195_chr11_3352927_3384146	1/0	g0138	1	0	0	0	0	0	ZNF195	chr11	3352927	3384146
ZNF195_chr11_3352927_3384146	0/0	g0139	1	0	1	0	0	0	ZNF195	chr11	3352927	3384146
ZNF195_chr11_3352927_3384146	0/0	g0140	1	1	0	0	0	0	ZNF195	chr11	3352927	3384146
ZNF195_chr11_3352927_3384146	0/0	g0141	1	1	0	0	0	0	ZNF195	chr11	3352927	3384146
ZNF195_chr11_3352927_3384146	0/0	g0142	1	0	0	0	1	0	ZNF195	chr11	3352927	3384146
ZNF195_chr11_3352927_3384146	0/0	g0143	1	1	0	0	0	0	ZNF195	chr11	3352927	3384146
ZNF197_chr3_44620036_44653471	0/0	g0001	30	1	12	15	0	2	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0002	14	2	8	1	0	3	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0003	10	0	3	6	0	1	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0004	9	1	5	0	2	1	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0005	8	7	1	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0006	7	0	0	0	0	7	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0007	7	5	2	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0008	7	2	2	0	0	3	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0009	6	6	0	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0010	6	1	0	5	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0011	6	4	0	1	0	1	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0012	6	0	1	4	0	1	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0013	6	0	2	3	1	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0014	5	1	2	1	1	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0015	5	0	0	5	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0016	5	0	4	0	1	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0017	4	0	0	4	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0018	4	0	1	0	2	1	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0019	3	3	0	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0020	3	3	0	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0021	3	0	0	0	3	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0022	3	3	0	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0023	3	0	0	3	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0024	3	3	0	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0025	3	0	0	3	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0026	2	1	0	1	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0027	2	0	1	1	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0028	2	0	0	2	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0029	2	0	0	2	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0030	2	0	0	0	1	1	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0031	2	0	2	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0032	2	2	0	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0033	2	2	0	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0034	2	1	1	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0035	2	1	1	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0036	2	0	1	0	0	1	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0037	2	0	0	0	0	2	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0038	2	2	0	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0039	2	2	0	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0040	2	2	0	0	0	0	ZNF197	chr3	44620036	44653471