JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF197_chr3_44620036_44653471	0/0	g0141	1	0	0	1	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0142	1	0	0	1	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0143	1	0	0	1	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0144	1	0	1	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0145	1	1	0	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0146	1	1	0	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0147	1	0	0	1	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0148	1	1	0	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0149	1	0	1	0	0	0	ZNF197	chr3	44620036	44653471
ZNF197_chr3_44620036_44653471	0/0	g0150	1	1	0	0	0	0	ZNF197	chr3	44620036	44653471
ZNF19_chr16_71468583_71494324	0/0	g0001	51	0	6	34	2	9	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0002	49	2	9	35	2	1	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0003	22	0	7	8	1	6	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0004	20	1	5	8	2	4	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	1/0	g0005	19	0	1	14	0	3	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0006	18	0	0	18	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0007	16	6	7	2	1	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0008	15	1	10	0	2	2	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0009	13	0	2	11	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0010	9	9	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0011	8	8	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0012	6	6	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0013	6	0	0	6	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0014	5	4	1	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0015	5	5	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0016	4	0	2	0	1	1	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0017	4	0	0	4	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0018	4	4	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0019	3	3	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0020	3	0	0	3	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0021	3	3	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0022	3	0	0	3	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0023	3	0	1	0	2	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0024	3	0	0	3	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0025	2	2	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0026	2	2	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0027	2	1	1	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0028	2	2	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0029	2	2	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0030	2	0	1	0	0	1	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0031	2	0	0	2	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0032	2	0	1	0	0	1	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0033	2	0	0	2	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0034	2	0	2	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0035	2	2	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0036	2	0	0	0	0	2	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0037	2	0	0	2	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0038	2	2	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0039	2	0	2	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0040	2	0	0	2	0	0	ZNF19	chr16	71468583	71494324