JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF19_chr16_71468583_71494324	0/0	g0091	1	1	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0092	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0093	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0094	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0095	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0096	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0097	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0098	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0099	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0100	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0101	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0102	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0103	1	0	1	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0104	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0105	1	0	1	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0106	1	0	1	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0107	1	0	0	0	0	1	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0108	1	1	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0109	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0110	1	0	1	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0111	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0112	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0113	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0114	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0115	1	0	1	0	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0116	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0117	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0118	1	0	0	1	0	0	ZNF19	chr16	71468583	71494324
ZNF19_chr16_71468583_71494324	0/0	g0119	1	1	0	0	0	0	ZNF19	chr16	71468583	71494324
ZNF200_chr16_3217325_3240158	0/0	g0001	65	2	12	42	1	8	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0002	33	2	10	19	0	2	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0003	32	12	1	19	0	0	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/1	g0004	26	1	9	10	1	4	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0005	16	0	0	13	1	2	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0006	13	0	0	5	0	8	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0007	11	11	0	0	0	0	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0008	9	8	1	0	0	0	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0009	6	0	0	6	0	0	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0010	6	0	3	0	3	0	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0011	6	6	0	0	0	0	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0012	5	0	3	1	1	0	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0013	4	0	3	0	0	1	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0014	4	3	0	1	0	0	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0015	4	0	3	0	1	0	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0016	4	0	0	3	0	1	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0017	4	3	1	0	0	0	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0018	4	0	3	0	1	0	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0019	3	3	0	0	0	0	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0020	3	0	3	0	0	0	ZNF200	chr16	3217325	3240158
ZNF200_chr16_3217325_3240158	0/0	g0021	3	0	2	0	1	0	ZNF200	chr16	3217325	3240158