JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF202_chr11_123718914_123746660	0/0	g0096	1	0	0	0	0	1	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0097	1	0	0	0	0	1	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0098	1	1	0	0	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0099	1	1	0	0	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0100	1	1	0	0	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0101	1	0	0	1	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0102	1	0	0	0	1	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0103	1	0	0	1	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0104	1	0	1	0	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0105	1	1	0	0	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0106	1	0	0	0	0	1	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0107	1	0	0	0	0	1	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0108	1	1	0	0	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0109	1	0	0	1	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0110	1	0	0	1	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0111	1	1	0	0	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0112	1	0	0	1	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/1	g0113	1	0	0	0	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0114	1	1	0	0	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0115	1	1	0	0	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0116	1	1	0	0	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0117	1	1	0	0	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0118	1	0	0	0	0	1	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0119	1	0	1	0	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0120	1	1	0	0	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0121	1	1	0	0	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0122	1	0	0	1	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0123	1	0	0	1	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0124	1	0	0	0	0	1	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0125	1	0	0	1	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0126	1	0	0	1	0	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0127	1	0	0	0	1	0	ZNF202	chr11	123718914	123746660
ZNF202_chr11_123718914_123746660	0/0	g0128	1	0	1	0	0	0	ZNF202	chr11	123718914	123746660
ZNF205_chr16_3107586_3125517	0/0	g0001	64	12	10	29	2	11	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	1/0	g0002	54	5	12	33	3	0	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	0/0	g0003	33	5	2	22	1	3	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	0/0	g0004	25	0	2	23	0	0	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	0/1	g0005	24	2	6	6	3	6	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	0/0	g0006	23	0	2	20	0	1	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	0/0	g0007	11	6	4	0	0	1	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	0/0	g0008	10	1	3	2	0	4	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	0/0	g0009	9	0	6	0	2	1	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	0/0	g0010	7	2	1	1	0	3	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	0/0	g0011	6	0	2	2	0	2	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	0/0	g0012	6	0	2	4	0	0	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	0/0	g0013	6	0	0	6	0	0	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	0/0	g0014	5	5	0	0	0	0	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	0/0	g0015	5	4	0	1	0	0	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	0/0	g0016	4	0	3	1	0	0	ZNF205	chr16	3107586	3125517
ZNF205_chr16_3107586_3125517	0/0	g0017	4	4	0	0	0	0	ZNF205	chr16	3107586	3125517