JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF208_chr19_21961095_22015943	0/0	g0337	1	0	1	0	0	0	ZNF208	chr19	21961095	22015943
ZNF208_chr19_21961095_22015943	0/0	g0338	1	0	1	0	0	0	ZNF208	chr19	21961095	22015943
ZNF208_chr19_21961095_22015943	0/0	g0339	1	1	0	0	0	0	ZNF208	chr19	21961095	22015943
ZNF20_chr19_12126350_12145350	0/1	g0001	108	4	32	52	4	15	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0002	36	0	1	31	1	3	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0003	31	16	3	11	0	1	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0004	25	2	11	2	6	4	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0005	23	14	4	4	1	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0006	7	0	2	5	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0007	6	6	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0008	6	0	3	0	1	2	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	1/0	g0009	5	3	1	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0010	5	0	0	2	0	3	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0011	5	5	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0012	4	0	0	3	1	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0013	4	0	3	0	1	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0014	4	4	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0015	4	4	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0016	4	4	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0017	3	0	0	3	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0018	3	0	1	2	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0019	3	3	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0020	3	0	0	3	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0021	3	3	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0022	3	3	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0023	2	2	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0024	2	1	1	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0025	2	0	0	0	0	2	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0026	2	0	2	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0027	2	1	0	1	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0028	2	2	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0029	2	2	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0030	2	0	0	0	0	2	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0031	1	0	0	1	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0032	1	0	0	0	0	1	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0033	1	1	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0034	1	1	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0035	1	1	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0036	1	1	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0037	1	0	0	1	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0038	1	1	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0039	1	1	0	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0040	1	0	0	1	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0041	1	0	0	1	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0042	1	0	0	1	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0043	1	0	0	0	0	1	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0044	1	0	0	1	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0045	1	0	1	0	0	0	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0046	1	0	0	0	0	1	ZNF20	chr19	12126350	12145350
ZNF20_chr19_12126350_12145350	0/0	g0047	1	1	0	0	0	0	ZNF20	chr19	12126350	12145350