JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF214_chr11_6992085_7025346	0/0	g0146	1	0	0	0	0	1	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0147	1	0	0	1	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0148	1	0	1	0	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0149	1	0	0	1	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0150	1	0	0	1	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0151	1	0	0	1	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0152	1	0	0	0	0	1	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0153	1	1	0	0	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0154	1	1	0	0	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0155	1	1	0	0	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0156	1	0	1	0	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0157	1	1	0	0	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0158	1	1	0	0	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0159	1	1	0	0	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0160	1	1	0	0	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0161	1	0	1	0	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0162	1	0	0	1	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0163	1	1	0	0	0	0	ZNF214	chr11	6992085	7025346
ZNF214_chr11_6992085_7025346	0/0	g0164	1	0	1	0	0	0	ZNF214	chr11	6992085	7025346
ZNF215_chr11_6921426_6963047	0/0	g0001	16	0	2	13	0	1	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0002	15	0	0	15	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0003	15	1	7	7	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0004	11	0	1	9	0	1	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0005	10	0	0	10	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0006	9	0	0	7	1	1	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0007	8	0	1	3	2	2	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0008	7	0	0	7	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0009	7	2	2	0	2	1	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0010	7	0	0	7	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0011	5	1	1	3	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0012	5	0	3	0	1	1	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0013	5	0	3	0	0	2	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0014	5	0	0	5	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0015	5	0	0	5	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0016	4	0	0	4	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0017	4	0	0	3	1	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0018	4	0	0	4	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0019	4	4	0	0	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0020	4	0	0	3	0	1	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/1	g0021	4	0	3	0	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0022	3	0	0	3	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0023	3	3	0	0	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0024	3	0	0	0	0	3	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0025	3	3	0	0	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0026	3	0	3	0	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0027	3	0	0	3	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0028	3	0	0	3	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0029	3	0	0	3	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0030	3	0	0	3	0	0	ZNF215	chr11	6921426	6963047
ZNF215_chr11_6921426_6963047	0/0	g0031	3	0	0	3	0	0	ZNF215	chr11	6921426	6963047