JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF221_chr19_43946228_43972709	0/0	g0171	1	1	0	0	0	0	ZNF221	chr19	43946228	43972709
ZNF221_chr19_43946228_43972709	0/0	g0172	1	1	0	0	0	0	ZNF221	chr19	43946228	43972709
ZNF221_chr19_43946228_43972709	0/0	g0173	1	1	0	0	0	0	ZNF221	chr19	43946228	43972709
ZNF221_chr19_43946228_43972709	0/0	g0174	1	0	0	1	0	0	ZNF221	chr19	43946228	43972709
ZNF221_chr19_43946228_43972709	0/0	g0175	1	1	0	0	0	0	ZNF221	chr19	43946228	43972709
ZNF221_chr19_43946228_43972709	0/0	g0176	1	1	0	0	0	0	ZNF221	chr19	43946228	43972709
ZNF221_chr19_43946228_43972709	0/0	g0177	1	0	0	1	0	0	ZNF221	chr19	43946228	43972709
ZNF221_chr19_43946228_43972709	0/0	g0178	1	0	0	1	0	0	ZNF221	chr19	43946228	43972709
ZNF221_chr19_43946228_43972709	0/0	g0179	1	1	0	0	0	0	ZNF221	chr19	43946228	43972709
ZNF221_chr19_43946228_43972709	0/0	g0180	1	1	0	0	0	0	ZNF221	chr19	43946228	43972709
ZNF221_chr19_43946228_43972709	0/0	g0181	1	1	0	0	0	0	ZNF221	chr19	43946228	43972709
ZNF221_chr19_43946228_43972709	0/0	g0182	1	1	0	0	0	0	ZNF221	chr19	43946228	43972709
ZNF222_chr19_44020379_44038110	0/0	g0001	54	3	11	35	0	5	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0002	48	2	16	21	4	5	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0003	38	2	6	25	2	3	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0004	30	4	8	15	2	1	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0005	28	0	10	18	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0006	11	1	0	7	2	1	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0007	11	9	1	1	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0008	10	0	2	8	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0009	9	8	0	0	0	1	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0010	9	1	4	2	0	2	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0011	8	1	1	5	0	1	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0012	6	0	1	5	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0013	5	0	0	5	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0014	5	5	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0015	5	0	0	5	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0016	5	0	1	4	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0017	5	3	2	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0018	4	3	1	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/1	g0019	4	0	1	0	0	2	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0020	4	4	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0021	4	3	1	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0022	3	3	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0023	3	3	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0024	3	0	0	2	1	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0025	3	0	0	3	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0026	3	0	1	2	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0027	3	0	0	3	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0028	3	0	0	3	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0029	2	2	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0030	2	0	0	2	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0031	2	1	1	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0032	2	2	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0033	2	2	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0034	2	0	0	2	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0035	2	2	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0036	2	2	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0037	2	2	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0038	2	0	0	1	0	1	ZNF222	chr19	44020379	44038110