JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF222_chr19_44020379_44038110	0/0	g0089	1	0	0	1	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0090	1	0	0	0	0	1	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0091	1	0	0	0	0	1	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0092	1	0	0	1	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0093	1	1	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0094	1	1	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0095	1	0	1	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0096	1	1	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	1/0	g0097	1	0	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0098	1	0	0	0	0	1	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0099	1	1	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0100	1	1	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0101	1	1	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0102	1	1	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0103	1	1	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0104	1	0	0	1	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0105	1	0	0	0	0	1	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0106	1	0	0	0	0	1	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0107	1	1	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0108	1	0	0	1	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0109	1	0	1	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0110	1	1	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF222_chr19_44020379_44038110	0/0	g0111	1	1	0	0	0	0	ZNF222	chr19	44020379	44038110
ZNF223_chr19_44047036_44072999	0/0	g0001	30	0	5	24	1	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0002	28	3	7	5	5	8	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0003	22	0	0	19	0	3	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0004	18	4	5	6	0	3	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0005	14	0	5	8	1	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0006	13	0	4	8	1	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0007	10	1	1	7	0	1	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0008	8	1	0	7	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0009	8	0	0	7	0	1	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0010	7	2	1	3	0	1	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0011	7	0	0	6	0	1	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0012	7	0	7	0	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0013	6	0	0	6	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0014	6	0	0	5	0	1	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0015	5	1	0	4	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0016	5	0	3	0	0	2	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0017	5	0	2	2	1	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0018	5	0	1	4	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0019	4	1	1	1	0	1	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	1/0	g0020	4	0	0	0	3	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0021	4	0	0	4	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0022	4	2	0	1	1	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/1	g0023	4	0	1	0	0	2	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0024	4	4	0	0	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0025	3	3	0	0	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0026	3	3	0	0	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0027	3	3	0	0	0	0	ZNF223	chr19	44047036	44072999