JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF223_chr19_44047036_44072999	0/0	g0178	1	0	0	0	0	1	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0179	1	0	0	1	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0180	1	0	1	0	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0181	1	0	0	1	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0182	1	0	0	0	0	1	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0183	1	1	0	0	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0184	1	0	0	1	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0185	1	1	0	0	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0186	1	0	0	1	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0187	1	0	0	0	1	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0188	1	0	0	0	0	1	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0189	1	0	0	0	0	1	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0190	1	0	0	0	0	1	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0191	1	1	0	0	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0192	1	0	1	0	0	0	ZNF223	chr19	44047036	44072999
ZNF223_chr19_44047036_44072999	0/0	g0193	1	0	1	0	0	0	ZNF223	chr19	44047036	44072999
ZNF224_chr19_44089361_44114826	0/0	g0001	98	10	22	46	8	12	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0002	40	0	3	37	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	1/0	g0003	39	10	13	7	2	6	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0004	36	0	11	23	0	2	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0005	34	0	2	31	0	1	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0006	15	13	2	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0007	9	0	0	8	0	1	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0008	9	9	0	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0009	5	0	0	5	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0010	4	0	0	4	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0011	4	0	0	4	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0012	4	4	0	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0013	4	0	0	4	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0014	3	3	0	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0015	3	3	0	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0016	3	0	0	3	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0017	3	0	2	0	0	1	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0018	3	3	0	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0019	3	3	0	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0020	3	0	0	3	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0021	3	0	2	0	1	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0022	2	2	0	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0023	2	0	0	2	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0024	2	0	0	2	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0025	2	0	0	0	2	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0026	2	0	2	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0027	2	2	0	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0028	2	0	0	2	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0029	2	0	1	0	0	1	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/1	g0030	2	0	0	0	0	1	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0031	2	0	2	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0032	2	2	0	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0033	2	2	0	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0034	2	2	0	0	0	0	ZNF224	chr19	44089361	44114826