JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF224_chr19_44089361_44114826	0/0	g0085	1	1	0	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0086	1	0	0	1	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0087	1	0	1	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0088	1	0	0	1	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0089	1	0	0	1	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0090	1	0	0	1	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0091	1	0	0	1	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0092	1	0	0	0	0	1	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0093	1	0	0	0	0	1	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0094	1	0	0	1	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0095	1	0	0	1	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0096	1	0	0	1	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0097	1	0	1	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0098	1	1	0	0	0	0	ZNF224	chr19	44089361	44114826
ZNF224_chr19_44089361_44114826	0/0	g0099	1	1	0	0	0	0	ZNF224	chr19	44089361	44114826
ZNF225_chr19_44108399_44139822	0/0	g0001	46	2	10	32	0	2	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/1	g0002	40	9	12	11	4	3	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0003	19	1	3	11	1	3	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0004	14	0	0	14	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0005	13	1	7	4	1	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0006	12	2	0	9	0	1	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0007	12	0	6	6	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0008	10	0	0	10	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	1/0	g0009	9	0	3	0	3	2	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0010	7	0	1	1	1	4	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0011	6	6	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0012	6	0	0	6	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0013	6	6	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0014	5	0	1	4	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0015	5	0	0	5	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0016	5	0	5	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0017	4	4	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0018	4	0	2	1	0	1	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0019	4	0	0	4	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0020	4	4	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0021	3	3	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0022	3	0	2	0	0	1	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0023	3	0	0	3	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0024	3	0	0	0	2	1	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0025	3	0	0	2	0	1	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0026	3	0	0	3	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0027	3	3	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0028	3	0	0	3	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0029	3	1	0	2	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0030	3	3	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0031	3	3	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0032	2	2	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0033	2	2	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0034	2	2	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0035	2	0	0	2	0	0	ZNF225	chr19	44108399	44139822