JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF225_chr19_44108399_44139822	0/0	g0136	1	0	0	1	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0137	1	0	0	1	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0138	1	1	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0139	1	1	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0140	1	0	1	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0141	1	1	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0142	1	0	0	0	0	1	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0143	1	0	1	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0144	1	0	0	1	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0145	1	1	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0146	1	1	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0147	1	1	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0148	1	1	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0149	1	1	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF225_chr19_44108399_44139822	0/0	g0150	1	1	0	0	0	0	ZNF225	chr19	44108399	44139822
ZNF226_chr19_44160100_44182685	1/0	g0001	66	9	18	30	1	7	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0002	50	0	11	35	2	2	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0003	32	1	10	20	1	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0004	27	6	5	13	0	3	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0005	27	1	8	9	1	8	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0006	12	0	1	9	0	2	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0007	8	5	3	0	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0008	7	2	2	3	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0009	4	4	0	0	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/1	g0010	4	0	0	0	1	2	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0011	4	0	0	4	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0012	4	4	0	0	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0013	4	0	0	4	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0014	4	0	1	1	0	2	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0015	3	3	0	0	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0016	3	3	0	0	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0017	3	3	0	0	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0018	3	0	0	3	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0019	3	3	0	0	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0020	3	0	0	3	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0021	3	0	0	3	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0022	3	0	0	3	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0023	2	2	0	0	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0024	2	2	0	0	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0025	2	0	0	2	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0026	2	1	0	1	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0027	2	0	0	2	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0028	2	0	2	0	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0029	2	0	1	0	1	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0030	2	1	1	0	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0031	2	0	1	0	0	1	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0032	2	0	0	2	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0033	2	1	1	0	0	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0034	2	0	0	1	1	0	ZNF226	chr19	44160100	44182685
ZNF226_chr19_44160100_44182685	0/0	g0035	2	2	0	0	0	0	ZNF226	chr19	44160100	44182685