JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF227_chr19_44207532_44242268	0/0	g0260	1	1	0	0	0	0	ZNF227	chr19	44207532	44242268
ZNF229_chr19_44421254_44453472	0/0	g0001	36	6	10	18	1	1	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0002	35	0	7	21	1	6	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0003	34	0	0	33	1	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0004	20	2	0	16	1	1	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0005	17	2	6	0	4	5	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0006	13	0	4	5	1	3	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0007	11	0	0	11	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0008	9	0	0	9	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0009	9	6	1	2	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0010	9	5	0	4	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0011	8	0	0	7	0	1	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0012	7	0	6	1	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0013	7	0	1	6	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0014	6	0	0	6	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0015	6	0	0	5	0	1	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0016	5	0	0	5	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0017	4	0	2	1	0	1	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0018	4	1	1	2	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0019	4	0	3	0	1	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0020	4	4	0	0	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0021	3	0	0	3	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0022	3	0	0	2	0	1	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0023	3	0	0	3	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0024	3	0	0	3	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0025	3	3	0	0	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0026	3	3	0	0	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0027	3	3	0	0	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0028	3	0	0	3	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0029	3	0	3	0	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0030	3	0	0	3	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0031	3	0	1	0	1	1	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0032	3	3	0	0	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0033	2	0	0	2	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0034	2	0	0	2	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0035	2	0	0	2	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0036	2	0	0	0	0	2	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0037	2	2	0	0	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0038	2	2	0	0	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0039	2	0	1	1	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0040	2	2	0	0	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0041	2	0	0	2	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0042	2	2	0	0	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0043	2	2	0	0	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0044	2	0	0	0	0	2	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0045	2	2	0	0	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0046	2	0	2	0	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0047	2	0	0	0	0	2	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0048	2	0	2	0	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0049	2	2	0	0	0	0	ZNF229	chr19	44421254	44453472