JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF229_chr19_44421254_44453472	0/0	g0150	1	0	0	0	1	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0151	1	0	0	1	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0152	1	0	0	1	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0153	1	0	0	1	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0154	1	0	0	1	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0155	1	0	0	1	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0156	1	0	0	1	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0157	1	0	0	1	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0158	1	0	0	1	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0159	1	0	0	1	0	0	ZNF229	chr19	44421254	44453472
ZNF229_chr19_44421254_44453472	0/0	g0160	1	0	0	1	0	0	ZNF229	chr19	44421254	44453472
ZNF22_chr10_44995923_45010326	1/0	g0001	178	39	21	102	4	11	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/1	g0002	66	3	31	13	9	9	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0003	63	4	7	41	3	8	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0004	34	1	4	22	1	6	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0005	13	1	0	12	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0006	12	0	0	12	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0007	10	9	1	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0008	10	4	4	0	0	2	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0009	10	8	2	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0010	5	4	1	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0011	4	0	0	4	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0012	3	3	0	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0013	3	3	0	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0014	3	0	0	3	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0015	2	2	0	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0016	2	0	0	0	0	2	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0017	2	1	1	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0018	2	0	0	2	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0019	2	2	0	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0020	2	2	0	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0021	2	2	0	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0022	2	1	0	1	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0023	2	0	2	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0024	2	0	0	0	0	2	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0025	2	0	0	0	0	2	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0026	2	0	1	0	0	1	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0027	1	0	1	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0028	1	0	0	1	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0029	1	0	0	0	0	1	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0030	1	1	0	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0031	1	1	0	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0032	1	0	1	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0033	1	0	0	1	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0034	1	1	0	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0035	1	0	1	0	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0036	1	0	0	0	1	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0037	1	0	0	1	0	0	ZNF22	chr10	44995923	45010326
ZNF22_chr10_44995923_45010326	0/0	g0038	1	0	0	1	0	0	ZNF22	chr10	44995923	45010326
ZNF230_chr19_43997957_44018924	0/0	g0001	101	6	21	46	8	20	ZNF230	chr19	43997957	44018924