JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF230_chr19_43997957_44018924	0/0	g0052	1	0	0	1	0	0	ZNF230	chr19	43997957	44018924
ZNF230_chr19_43997957_44018924	0/0	g0053	1	0	0	0	0	1	ZNF230	chr19	43997957	44018924
ZNF230_chr19_43997957_44018924	0/0	g0054	1	1	0	0	0	0	ZNF230	chr19	43997957	44018924
ZNF230_chr19_43997957_44018924	0/0	g0055	1	0	1	0	0	0	ZNF230	chr19	43997957	44018924
ZNF230_chr19_43997957_44018924	0/0	g0056	1	1	0	0	0	0	ZNF230	chr19	43997957	44018924
ZNF230_chr19_43997957_44018924	0/0	g0057	1	0	0	1	0	0	ZNF230	chr19	43997957	44018924
ZNF230_chr19_43997957_44018924	0/0	g0058	1	0	1	0	0	0	ZNF230	chr19	43997957	44018924
ZNF230_chr19_43997957_44018924	0/0	g0059	1	1	0	0	0	0	ZNF230	chr19	43997957	44018924
ZNF230_chr19_43997957_44018924	0/0	g0060	1	1	0	0	0	0	ZNF230	chr19	43997957	44018924
ZNF230_chr19_43997957_44018924	0/0	g0061	1	1	0	0	0	0	ZNF230	chr19	43997957	44018924
ZNF230_chr19_43997957_44018924	0/0	g0062	1	0	0	1	0	0	ZNF230	chr19	43997957	44018924
ZNF232_chr17_5100736_5116878	0/0	g0001	76	1	8	53	4	10	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0002	64	2	24	23	5	10	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0003	14	1	12	0	0	1	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0004	14	0	1	11	0	2	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0005	14	1	3	8	1	1	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0006	13	1	0	11	0	1	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0007	12	2	3	6	0	1	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0008	11	0	0	11	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/1	g0009	10	0	4	0	3	2	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0010	10	5	2	0	1	2	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0011	10	0	0	10	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0012	8	7	1	0	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0013	8	1	2	4	0	1	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0014	8	0	0	8	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0015	7	0	4	0	0	3	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0016	7	4	2	1	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0017	6	0	0	4	0	2	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0018	6	6	0	0	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0019	6	0	0	6	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0020	5	5	0	0	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0021	5	5	0	0	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0022	5	0	3	2	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0023	5	0	0	5	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0024	4	3	1	0	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0025	4	0	0	4	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0026	4	0	0	4	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0027	4	0	0	4	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0028	4	0	0	4	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0029	3	3	0	0	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0030	3	3	0	0	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0031	3	0	2	1	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0032	3	3	0	0	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0033	2	2	0	0	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0034	2	2	0	0	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0035	2	2	0	0	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0036	2	0	2	0	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0037	2	2	0	0	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0038	2	2	0	0	0	0	ZNF232	chr17	5100736	5116878
ZNF232_chr17_5100736_5116878	0/0	g0039	2	2	0	0	0	0	ZNF232	chr17	5100736	5116878