JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF234_chr19_44136554_44165313	0/0	g0169	1	1	0	0	0	0	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0170	1	0	1	0	0	0	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0171	1	0	0	1	0	0	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0172	1	0	0	1	0	0	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0173	1	0	0	1	0	0	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0174	1	0	1	0	0	0	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0175	1	0	0	1	0	0	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0176	1	0	0	1	0	0	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0177	1	1	0	0	0	0	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0178	1	1	0	0	0	0	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0179	1	0	0	1	0	0	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0180	1	0	0	1	0	0	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0181	1	0	0	1	0	0	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0182	1	0	0	1	0	0	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0183	1	0	1	0	0	0	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0184	1	0	0	0	0	1	ZNF234	chr19	44136554	44165313
ZNF234_chr19_44136554_44165313	0/0	g0185	1	0	0	0	0	1	ZNF234	chr19	44136554	44165313
ZNF235_chr19_44281348_44310025	0/0	g0001	84	1	14	58	1	10	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/1	g0002	28	6	5	13	1	2	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0003	26	2	1	20	0	3	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	1/0	g0004	21	2	8	5	0	5	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0005	12	0	8	4	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0006	12	0	0	12	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0007	10	0	0	10	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0008	7	1	2	0	1	3	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0009	6	0	0	6	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0010	6	6	0	0	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0011	6	0	0	6	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0012	5	5	0	0	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0013	5	5	0	0	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0014	5	2	0	1	2	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0015	5	0	0	5	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0016	5	0	1	0	0	4	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0017	5	0	0	5	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0018	4	0	4	0	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0019	4	4	0	0	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0020	4	4	0	0	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0021	3	3	0	0	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0022	3	3	0	0	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0023	3	3	0	0	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0024	3	3	0	0	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0025	3	0	0	3	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0026	3	2	1	0	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0027	3	0	1	1	0	1	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0028	2	2	0	0	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0029	2	1	1	0	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0030	2	2	0	0	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0031	2	0	0	2	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0032	2	0	0	2	0	0	ZNF235	chr19	44281348	44310025
ZNF235_chr19_44281348_44310025	0/0	g0033	2	2	0	0	0	0	ZNF235	chr19	44281348	44310025