JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF239_chr10_43551344_43579616	0/0	g0168	1	0	0	1	0	0	ZNF239	chr10	43551344	43579616
ZNF239_chr10_43551344_43579616	0/0	g0169	1	0	0	1	0	0	ZNF239	chr10	43551344	43579616
ZNF239_chr10_43551344_43579616	0/0	g0170	1	0	0	1	0	0	ZNF239	chr10	43551344	43579616
ZNF239_chr10_43551344_43579616	0/0	g0171	1	0	0	0	0	1	ZNF239	chr10	43551344	43579616
ZNF239_chr10_43551344_43579616	0/0	g0172	1	0	0	1	0	0	ZNF239	chr10	43551344	43579616
ZNF239_chr10_43551344_43579616	0/0	g0173	1	0	0	1	0	0	ZNF239	chr10	43551344	43579616
ZNF239_chr10_43551344_43579616	0/0	g0174	1	0	0	1	0	0	ZNF239	chr10	43551344	43579616
ZNF23_chr16_71442597_71467247	0/0	g0001	60	2	16	37	2	3	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	1/0	g0002	52	0	7	36	3	5	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0003	49	0	4	32	2	11	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0004	21	1	5	8	2	5	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0005	18	2	12	0	2	2	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0006	18	0	5	13	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0007	13	5	7	0	1	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0008	11	11	0	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0009	11	11	0	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0010	10	9	1	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0011	9	9	0	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0012	7	7	0	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0013	7	0	0	7	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/1	g0014	6	0	2	0	1	2	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0015	6	0	0	6	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0016	5	0	0	0	0	5	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0017	5	4	0	0	0	1	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0018	4	0	1	0	0	3	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0019	4	0	0	4	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0020	3	3	0	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0021	3	3	0	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0022	3	0	0	3	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0023	3	3	0	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0024	2	2	0	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0025	2	1	0	0	1	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0026	2	2	0	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0027	2	2	0	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0028	2	0	0	2	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0029	2	2	0	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0030	2	0	2	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0031	2	0	0	2	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0032	2	0	0	0	0	2	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0033	2	0	0	0	2	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0034	2	0	2	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0035	2	0	2	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0036	2	0	1	0	0	1	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0037	2	0	0	2	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0038	2	0	2	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0039	2	0	0	2	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0040	2	0	0	2	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0041	1	0	0	1	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0042	1	1	0	0	0	0	ZNF23	chr16	71442597	71467247
ZNF23_chr16_71442597_71467247	0/0	g0043	1	1	0	0	0	0	ZNF23	chr16	71442597	71467247