JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF260_chr19_36505687_36533271	0/0	g0165	1	1	0	0	0	0	ZNF260	chr19	36505687	36533271
ZNF260_chr19_36505687_36533271	0/0	g0166	1	0	0	1	0	0	ZNF260	chr19	36505687	36533271
ZNF260_chr19_36505687_36533271	0/0	g0167	1	1	0	0	0	0	ZNF260	chr19	36505687	36533271
ZNF260_chr19_36505687_36533271	0/0	g0168	1	1	0	0	0	0	ZNF260	chr19	36505687	36533271
ZNF260_chr19_36505687_36533271	0/0	g0169	1	1	0	0	0	0	ZNF260	chr19	36505687	36533271
ZNF260_chr19_36505687_36533271	0/0	g0170	1	1	0	0	0	0	ZNF260	chr19	36505687	36533271
ZNF260_chr19_36505687_36533271	0/0	g0171	1	0	0	0	0	1	ZNF260	chr19	36505687	36533271
ZNF260_chr19_36505687_36533271	0/0	g0172	1	0	0	1	0	0	ZNF260	chr19	36505687	36533271
ZNF260_chr19_36505687_36533271	0/0	g0173	1	0	0	1	0	0	ZNF260	chr19	36505687	36533271
ZNF260_chr19_36505687_36533271	0/0	g0174	1	1	0	0	0	0	ZNF260	chr19	36505687	36533271
ZNF263_chr16_3278491_3296460	1/1	g0001	153	25	17	94	3	12	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0002	52	0	16	24	4	8	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0003	28	2	17	4	3	2	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0004	15	1	1	7	0	6	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0005	13	13	0	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0006	11	0	1	10	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0007	10	7	3	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0008	8	8	0	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0009	6	6	0	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0010	5	0	2	0	2	1	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0011	5	5	0	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0012	5	0	5	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0013	5	5	0	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0014	5	4	1	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0015	4	0	0	4	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0016	3	2	0	1	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0017	2	2	0	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0018	2	0	0	0	0	2	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0019	2	0	0	2	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0020	2	0	0	0	2	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0021	2	0	2	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0022	2	0	1	0	0	1	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0023	2	1	0	0	0	1	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0024	2	0	0	2	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0025	2	0	2	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0026	2	2	0	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0027	2	2	0	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0028	2	2	0	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0029	2	2	0	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0030	1	1	0	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0031	1	0	0	1	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0032	1	0	0	1	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0033	1	0	0	0	0	1	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0034	1	0	0	1	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0035	1	0	1	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0036	1	0	0	1	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0037	1	0	0	1	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0038	1	0	1	0	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0039	1	0	0	1	0	0	ZNF263	chr16	3278491	3296460
ZNF263_chr16_3278491_3296460	0/0	g0040	1	1	0	0	0	0	ZNF263	chr16	3278491	3296460