JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF268_chr12_133176495_133219832	0/0	g0161	1	0	0	1	0	0	ZNF268	chr12	133176495	133219832
ZNF268_chr12_133176495_133219832	0/0	g0162	1	0	1	0	0	0	ZNF268	chr12	133176495	133219832
ZNF268_chr12_133176495_133219832	0/0	g0163	1	0	0	1	0	0	ZNF268	chr12	133176495	133219832
ZNF268_chr12_133176495_133219832	0/0	g0164	1	0	0	0	1	0	ZNF268	chr12	133176495	133219832
ZNF268_chr12_133176495_133219832	0/0	g0165	1	0	0	0	0	1	ZNF268	chr12	133176495	133219832
ZNF268_chr12_133176495_133219832	0/0	g0166	1	0	0	1	0	0	ZNF268	chr12	133176495	133219832
ZNF268_chr12_133176495_133219832	0/0	g0167	1	1	0	0	0	0	ZNF268	chr12	133176495	133219832
ZNF268_chr12_133176495_133219832	0/0	g0168	1	0	0	1	0	0	ZNF268	chr12	133176495	133219832
ZNF268_chr12_133176495_133219832	0/0	g0169	1	1	0	0	0	0	ZNF268	chr12	133176495	133219832
ZNF268_chr12_133176495_133219832	0/0	g0170	1	1	0	0	0	0	ZNF268	chr12	133176495	133219832
ZNF268_chr12_133176495_133219832	0/0	g0171	1	0	0	0	0	1	ZNF268	chr12	133176495	133219832
ZNF26_chr12_132981367_133032102	0/0	g0001	18	1	3	13	0	1	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0002	15	2	7	4	0	2	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0003	9	1	3	0	2	3	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0004	8	0	2	1	4	1	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0005	7	1	0	0	2	4	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0006	6	0	2	4	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0007	6	0	3	2	0	1	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0008	6	4	2	0	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0009	5	5	0	0	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0010	4	0	4	0	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0011	4	0	0	4	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0012	4	3	1	0	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0013	4	3	1	0	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0014	4	0	0	3	0	1	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0015	4	0	1	2	1	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0016	4	0	3	0	0	1	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0017	3	2	1	0	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0018	3	3	0	0	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0019	3	0	0	3	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0020	3	0	3	0	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0021	3	0	1	0	1	1	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0022	3	0	0	0	3	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0023	3	3	0	0	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0024	3	3	0	0	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0025	2	0	2	0	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0026	2	0	1	1	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0027	2	0	0	2	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0028	2	0	0	1	1	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0029	2	0	0	2	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0030	2	0	0	2	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0031	2	0	0	2	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0032	2	0	0	0	0	2	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0033	2	2	0	0	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0034	2	0	2	0	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0035	2	0	0	2	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0036	2	0	0	0	0	2	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0037	2	0	0	2	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0038	2	2	0	0	0	0	ZNF26	chr12	132981367	133032102
ZNF26_chr12_132981367_133032102	0/0	g0039	2	2	0	0	0	0	ZNF26	chr12	132981367	133032102