JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF282_chr7_149190546_149231238	0/0	g0144	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0145	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0146	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0147	1	0	0	1	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0148	1	0	0	0	0	1	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0149	1	0	0	0	0	1	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0150	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0151	1	0	0	0	0	1	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0152	1	0	1	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0153	1	0	1	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0154	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0155	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0156	1	0	0	0	0	1	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0157	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0158	1	0	0	1	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0159	1	0	0	1	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0160	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0161	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0162	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0163	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0164	1	0	1	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0165	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0166	1	0	1	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0167	1	0	0	0	1	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0168	1	0	1	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0169	1	0	1	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0170	1	0	1	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0171	1	0	1	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0172	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0173	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0174	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0175	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF282_chr7_149190546_149231238	0/0	g0176	1	1	0	0	0	0	ZNF282	chr7	149190546	149231238
ZNF283_chr19_43822321_43857017	0/0	g0001	47	5	7	22	3	10	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0002	47	4	11	27	3	2	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0003	19	0	3	16	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0004	13	1	4	8	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0005	9	0	1	8	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0006	8	0	0	7	1	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0007	7	0	5	1	0	1	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0008	7	7	0	0	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0009	7	0	1	6	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0010	6	6	0	0	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0011	6	6	0	0	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0012	5	0	1	4	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0013	5	0	0	5	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0014	3	0	2	1	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0015	3	2	1	0	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0016	3	0	0	0	0	3	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0017	3	0	0	0	1	2	ZNF283	chr19	43822321	43857017