JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF283_chr19_43822321_43857017	0/0	g0168	1	0	1	0	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0169	1	0	0	1	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0170	1	0	0	1	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0171	1	0	0	0	0	1	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	1/0	g0172	1	0	0	0	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0173	1	0	0	1	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0174	1	1	0	0	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0175	1	0	0	1	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0176	1	0	0	1	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0177	1	0	0	1	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0178	1	0	0	0	0	1	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0179	1	0	0	1	0	0	ZNF283	chr19	43822321	43857017
ZNF283_chr19_43822321_43857017	0/0	g0180	1	0	1	0	0	0	ZNF283	chr19	43822321	43857017
ZNF284_chr19_44067159_44094613	0/0	g0001	21	0	5	16	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0002	18	0	6	12	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0003	17	3	2	12	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0004	10	3	2	3	1	1	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0005	9	0	4	2	2	1	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0006	7	0	5	2	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0007	6	1	2	0	1	2	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0008	6	0	0	6	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/1	g0009	5	0	1	0	0	3	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0010	5	0	5	0	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0011	5	0	2	3	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0012	4	0	0	4	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0013	4	0	1	3	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0014	4	0	0	4	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0015	4	0	0	4	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0016	4	0	1	1	1	1	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0017	4	4	0	0	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0018	4	0	0	4	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0019	4	0	0	4	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0020	4	1	0	3	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0021	4	0	1	3	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0022	3	0	0	3	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0023	3	0	0	2	0	1	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0024	3	2	0	0	0	1	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0025	3	0	1	1	0	1	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0026	3	0	1	1	0	1	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0027	3	1	0	2	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0028	3	3	0	0	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0029	3	2	1	0	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0030	3	1	1	1	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0031	3	0	0	3	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0032	3	0	1	2	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0033	3	0	1	2	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0034	3	0	0	3	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0035	3	1	1	1	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	1/0	g0036	3	0	1	0	1	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0037	2	0	0	2	0	0	ZNF284	chr19	44067159	44094613