JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF284_chr19_44067159_44094613	0/0	g0238	1	0	0	1	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0239	1	0	0	1	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0240	1	1	0	0	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0241	1	1	0	0	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0242	1	1	0	0	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0243	1	1	0	0	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0244	1	0	0	1	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0245	1	0	0	0	0	1	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0246	1	0	0	1	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0247	1	0	1	0	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0248	1	1	0	0	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0249	1	0	0	1	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0250	1	0	0	1	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0251	1	0	0	1	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0252	1	0	0	1	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0253	1	0	0	0	0	1	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0254	1	0	0	1	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0255	1	1	0	0	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0256	1	1	0	0	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0257	1	0	0	0	0	1	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0258	1	0	1	0	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0259	1	0	0	1	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0260	1	0	0	1	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0261	1	0	0	1	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0262	1	0	0	1	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0263	1	1	0	0	0	0	ZNF284	chr19	44067159	44094613
ZNF284_chr19_44067159_44094613	0/0	g0264	1	1	0	0	0	0	ZNF284	chr19	44067159	44094613
ZNF285_chr19_44377298_44406608	0/0	g0001	41	0	8	20	3	10	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0002	22	0	7	15	0	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0003	19	0	0	16	1	2	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0004	15	1	9	1	4	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0005	15	0	0	15	0	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0006	13	2	2	8	0	1	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0007	9	8	1	0	0	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0008	9	0	0	8	0	1	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0009	9	0	0	8	1	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0010	9	0	7	2	0	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0011	8	0	2	0	1	5	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0012	8	0	0	8	0	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0013	5	5	0	0	0	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0014	5	4	1	0	0	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0015	4	0	1	2	0	1	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0016	4	0	0	4	0	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0017	4	0	0	4	0	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0018	4	0	2	0	2	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0019	3	0	3	0	0	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0020	3	3	0	0	0	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0021	3	0	3	0	0	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0022	3	3	0	0	0	0	ZNF285	chr19	44377298	44406608
ZNF285_chr19_44377298_44406608	0/0	g0023	3	0	0	3	0	0	ZNF285	chr19	44377298	44406608