JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF300_chr5_150889399_150909980	0/0	g0036	1	0	0	1	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0037	1	1	0	0	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0038	1	0	0	1	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0039	1	0	0	1	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0040	1	0	0	0	0	1	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0041	1	1	0	0	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0042	1	0	0	0	0	1	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0043	1	0	1	0	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0044	1	1	0	0	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0045	1	0	0	0	1	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0046	1	0	1	0	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0047	1	0	0	0	0	1	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0048	1	0	1	0	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0049	1	0	0	0	0	1	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0050	1	0	0	1	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0051	1	0	0	1	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0052	1	0	0	0	1	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0053	1	0	1	0	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0054	1	0	0	1	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0055	1	0	0	0	0	1	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0056	1	0	1	0	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0057	1	0	1	0	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0058	1	1	0	0	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0059	1	1	0	0	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0060	1	1	0	0	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0061	1	0	0	1	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0062	1	0	0	1	0	0	ZNF300	chr5	150889399	150909980
ZNF300_chr5_150889399_150909980	0/0	g0063	1	1	0	0	0	0	ZNF300	chr5	150889399	150909980
ZNF302_chr19_34672678_34691396	0/1	g0001	47	12	13	12	2	7	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0002	34	0	3	28	3	0	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0003	29	7	5	9	1	7	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0004	27	0	4	21	1	1	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0005	26	0	0	25	0	1	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	1/0	g0006	24	0	2	20	1	0	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0007	15	0	3	10	1	1	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0008	14	0	7	7	0	0	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0009	11	3	0	4	3	1	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0010	10	0	0	10	0	0	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0011	8	6	2	0	0	0	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0012	7	6	0	1	0	0	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0013	6	0	0	6	0	0	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0014	6	0	5	0	0	1	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0015	6	0	3	0	0	3	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0016	6	0	5	1	0	0	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0017	6	2	0	4	0	0	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0018	4	0	0	4	0	0	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0019	4	0	1	3	0	0	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0020	4	0	0	3	0	1	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0021	4	0	0	4	0	0	ZNF302	chr19	34672678	34691396
ZNF302_chr19_34672678_34691396	0/0	g0022	4	3	0	0	0	1	ZNF302	chr19	34672678	34691396