JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF302_chr19_34672678_34691396	0/0	g0123	1	0	0	1	0	0	ZNF302	chr19	34672678	34691396
ZNF304_chr19_57346271_57364898	0/0	g0001	97	6	16	59	3	13	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0002	71	1	11	45	2	12	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0003	48	2	2	43	0	1	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/1	g0004	34	14	9	7	3	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0005	14	0	3	7	0	4	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0006	8	0	0	7	0	1	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0007	8	0	5	1	2	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0008	7	0	3	2	2	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0009	5	0	0	5	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0010	5	4	1	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0011	5	1	0	3	1	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0012	5	4	1	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0013	4	0	4	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0014	4	0	0	3	1	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0015	4	1	1	0	0	2	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0016	4	0	0	4	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0017	4	1	2	0	0	1	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0018	4	4	0	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0019	4	4	0	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0020	3	0	0	3	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0021	3	0	0	1	0	2	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0022	3	2	1	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0023	3	3	0	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0024	2	2	0	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0025	2	0	0	2	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0026	2	0	0	2	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0027	2	0	1	0	0	1	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0028	2	2	0	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0029	2	2	0	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0030	2	0	2	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0031	2	0	2	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0032	2	2	0	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0033	2	0	1	0	0	1	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0034	2	0	0	2	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0035	2	2	0	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0036	2	0	0	2	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0037	2	1	1	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0038	2	0	2	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0039	2	0	0	2	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0040	2	0	1	0	1	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0041	2	2	0	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0042	2	2	0	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0043	2	2	0	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0044	2	2	0	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0045	2	2	0	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0046	2	2	0	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0047	1	0	1	0	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0048	1	0	0	1	0	0	ZNF304	chr19	57346271	57364898
ZNF304_chr19_57346271_57364898	0/0	g0049	1	0	1	0	0	0	ZNF304	chr19	57346271	57364898